Cyprinus carpio (common carp): 109053638
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Entry
109053638 CDS
T05134
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109053638
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109053638
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
109053638
NCBI-ProteinID:
XP_042573990
Ensembl:
ENSCCRG00000006192
UniProt:
A0A8C1XW16
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All DBs
Position
B2:12309978..12322369
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AA seq
537 aa
AA seq
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MDGIASDVAVGVKRSSDELLSGSLYNSSNSSVTANGSDSKKLRVEDSMDSPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVTYYTAVTPQVRNVP
VFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSAAGESVLTPAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPSGDGQPPVDPSVAATLSKDSTSLLGTPSG
MVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSGPGGVLLVSNLNEEMVTPQS
LFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQT
VQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPENVTEEDLRLL
FSNSGGTVKAFKFFQDRKMALLQTSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgcaagtgatgttgcagttggtgtgaagagaagctcagatgaattgctg
tctggcagtctgtacaacagttcaaactcttcagtcactgctaatggaagtgacagtaag
aaactgagggtggaggacagtatggacagcccaccatccagagtcattcatatccggaaa
ctccccaatgaggtttctgagactgaggtcatcgccctgggtttgccctttggaaaggtc
actaatatcctgatgcttaaaggcaaaaatcaggcatttttggagctaggaacagaggaa
gcagctgttaccatggtgacctactacacagctgttacacctcaagtgcgtaatgtccca
gtgttcattcagtactccaaccacaaagaactcaagactgacagtgcgctcaaccagcga
gctcaagctgtgcttcaggcggtgtccgcggtacaggagggtggctctccaagctcggcg
gccggcgagagtgtgttaacgcctgcccccagcccagtactgcgaataatcatcgacaac
atgttctacccagtcaccctggacgtcctccaacagatcttctccaagtttgggaccgtc
atgaagataatcacatttaccaaaaataatcagttccaggctcttttgcagttcagtgac
ccagtaaatgcccagcaggccaaattgtccttggatggccagaacatatacaactcctgc
tgcactttgcgcatcgacttctccaagctggtcaacctgaatgtaaaatacaacaacgac
aaaagccgggattacacccggcccgagctgccctcaggagatggtcagccgcccgtggac
ccatctgtggcagccactctcagcaaagattccacctccctgctcggtactccctctgga
atggtaacttcctactctagtggtggagggtttccatcttctctaggggccatcagccct
ctgagtgcagcagcagcagcggcggcagcagcagggagggtggcgttgtctggacattcg
ggacctggtggagtgctcctggtcagcaacctcaacgaagagatggttacgccccaaagt
ctgtttaccctcttcggtgtctacggtgacgtgcagcgtgtgaagatcctttacaataag
aaggacagtgctttaatccagatgtctgatggaaaccaagctcagttagccatgagccat
ctgaatgggcagaagatgtatggcaagatcattcgtgtgaccctctccaagcaccagacg
gtacagctgcccagggagggtttagatgatcagggcttgaccaaggactttaccagttct
cctctgcatcgcttcaagaagcctgggtctaagaacttccagaacatcttccccccttca
gctactctccatctctctaacatacctgagaatgtgacagaggaggatttacgactgctc
ttctcaaattccggcggtacagtgaaagcgttcaagtttttccaagatcgcaaaatggct
ctgctgcagacgtccacggtggaggaggcgattcaggcactcattgaccttcacaactac
gacatgggccgtggccaccgcctgagagtgtctttctcaaagtccaccatctga
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