Cyprinus carpio (common carp): 109053685
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Entry
109053685 CDS
T05134
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03410
Base excision repair
ccar04140
Autophagy - animal
ccar04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109053685
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109053685
09143 Cell growth and death
04217 Necroptosis
109053685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109053685
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109053685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109053685
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
109053685
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
109053685
MMR (mismatch excision repair)
Other MMR factors
109053685
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
109053685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
ANAPC15
Motif
Other DBs
NCBI-GeneID:
109053685
NCBI-ProteinID:
XP_042627300
Ensembl:
ENSCCRG00000007516
UniProt:
A0A9R1SC92
LinkDB
All DBs
Position
A15:complement(19002904..19006106)
Genome browser
AA seq
198 aa
AA seq
DB search
MGKDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFE
DMAKQDKVRYEREMKNYIPPKGEKKRRFKDPNAPKRPPSAFFIFCGDYRPKIKGENPGLS
IGNIAKKLGEMWNSLSAEVKQPYEKKAAKLKEKYDKDIALYRTKGIAGLSKEDGGEDDDE
DENEEEEEEEEDDEEDDE
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatccaaggaagcccagaggaaagatgtcctcttatgcctactttgtgcaa
acctgccgtgaagaacacaaaaagaagcaccccgaagcctctgtaaacttctctgaattc
tccaagaagtgttcggagcgatggaagacaatgtctgccaaagagaagggtaaatttgag
gatatggccaagcaagataaggttcgctatgagagagaaatgaagaactacattccaccg
aagggcgagaagaagaggcgatttaaggatcccaacgcacccaagagaccaccgtcagca
ttcttcattttctgtggtgactaccgccctaagattaagggggagaacccaggtctgtcc
atcggaaacattgccaagaagcttggagaaatgtggaatagcttatcggctgaggtgaag
cagccctatgagaagaaagcagcaaagctgaaggagaagtatgacaaggatattgcccta
taccgtacaaagggaattgcaggcttgtccaaagaagacggtggggaggatgatgatgag
gacgaaaatgaagaagaggaggaggaggaggaagatgatgaggaggatgatgagtag
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integrated database retrieval system
