Cyprinus carpio (common carp): 109053701
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Entry
109053701 CDS
T05134
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109053701
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109053701
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
DUF6687
Motif
Other DBs
NCBI-GeneID:
109053701
NCBI-ProteinID:
XP_018926564
UniProt:
A0A9Q9V032
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Position
B17:complement(9884312..9890023)
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AA seq
650 aa
AA seq
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MLRAISIFQSSYSLTDCFTSLCVTATPIQHIITPNIFSCGLLDRSPGGEGTLLSAVLSHP
CGLRGSAGVMKQEVRAALGSARPWLHSEANLSAQRGVGLARVHFEKQPPANLRKSNFFHF
VLALYDSQGQSVEIEHTAFVDFVEKEKEPVSEKTNNGIYYKLQLLYNNGVRTQQDLYIRL
IDSVTKQAIVFEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPIIIDRFFLKF
FLKCNQNCLKNAGNPRDTRRFQVLVSTTASVKAHILAISDNIFVHNNSKHGRRPKRFEII
EAEIPCIKAISPSEGWTSGGASVIIIGDQFFDGLQVVFGTVMVWSEVITPHAIRVQTPPR
HIPGVVEVTLSYKSKQFCRGPPGRFIYTALNEPTIDYGFQRLQKVIPHHPGDMERLPKEV
LLKRAADLLEMFYGMPHTNQEMILKRASDIALHAIPHGMMGGNSFDAQLPVNTEISPDVE
QTSLSVGFSRSSNSGFTAGSTSQQSEFSNTNTCMNTHTHTHSHSNMPRHTHSNTHPSMAG
HTQTHTRPSVSNFSVATQPLLDCPTADTQHYIVKQKSAFAPVLKLQSSTAQASGVPVCTP
CMTSDTSHTLRRTNEKLHSEVAIFVVREGQHLFCILKVLPVQAIQKQYKF
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgcgatttccatctttcaaagttcttacagcttgactgactgtttcacgtcc
ctgtgcgtcacagccacgcccatacaacacattattacacctaacatattctcatgcggt
ttgttagaccgcagtcctgggggagaaggaactttgttgtcagctgttctctcgcatccc
tgtggactgagaggcagcgcgggagtcatgaagcaggaggtcagggctgctctggggtca
gctcgtccctggctccactcagaggcgaacctttctgctcagagaggtgttggtcttgcc
cgggtgcattttgagaaacagccgcctgccaacctgcgcaagtcaaacttctttcacttt
gtgttggctttatatgatagtcagggtcagtctgtggagatagagcacactgcgtttgtg
gactttgttgaaaaggagaaggagccagtaagtgaaaaaacaaacaatggaatctattac
aaactccagttactgtacaacaatggtgtcagaacacagcaagatctatacatccgtttg
atagactctgtgaccaaacaggcaattgtgtttgaaggtcaagataaaaaccctgaaatg
tgtcgtgttcttctcactcatgagataatgtgcagccgatgttgtgataagaaaagttgt
ggaaacaggaacgaaacaccatcagaccccatcattattgaccggttcttcctgaaattt
tttctcaaatgtaatcaaaattgcctgaaaaatgcagggaacccacgagacacacgtcgt
ttccaggtgctggtctctaccacagcctctgttaaggcccacattctagccatttcagat
aatatatttgtccataacaattcaaagcatggcagaagaccaaaaagatttgagataatt
gaagctgagatcccctgcatcaaggccatcagtccgagtgaaggttggacgtcaggtgga
gcctcagtgattattattggagatcagttctttgatggtctacaagtggttttcggaaca
gttatggtctggagtgaggtgattacaccacatgcgattcgtgtgcagactccacctcgt
cacatccctggtgttgtagaagttacactgtcctacaagtccaagcagttctgcagggga
cctccaggacgctttatttacactgctttaaatgagccaaccattgactacgggttccag
cggctgcagaaggtgattcctcatcatccaggcgatatggaaagactaccaaaagaggtc
ttactgaagagagcagctgatctcttagagatgttttatggaatgcctcacaccaaccag
gagatgattctgaagcgtgcgtctgatatagcactccatgccatcccacatggaatgatg
ggtggaaactcctttgatgcacagttacccgtgaacacagaaatttcaccggatgtagaa
caaacatctctttcagtgggtttcagtcggagttcaaacagtggcttcactgcaggcagc
acatcccagcagtctgaattcagcaataccaatacatgcatgaatacacacacacataca
cactctcactccaacatgccaagacacacacactcaaacacacacccgtccatggctggg
cacacacaaacacacacacgcccttctgtgtcaaacttctctgtggccacacagccattg
ttagactgtcctacagcggacacacaacactacattgtgaagcaaaaaagtgcatttgct
ccggttctgaagctgcagtcctcaacagcacaagcttcaggtgtccccgtctgcacgcct
tgcatgactagtgacaccagtcacactctcagaaggacaaatgaaaaactccattcagaa
gttgcgatctttgtagtcagggaaggacaacatctgttttgcattttgaaggttctccca
gtgcaggcaatacaaaagcaatacaaattttaa
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