Cyprinus carpio (common carp): 109054095
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Entry
109054095 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109054095
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Others
Retriever complex
109054095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
109054095
NCBI-ProteinID:
XP_042591110
Ensembl:
ENSCCRG00000005216
ENSCCRG00000028933
UniProt:
A0A9Q9WX27
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All DBs
Position
B12:7783990..7799443
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AA seq
963 aa
AA seq
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MASVQWHSRARKYESELHMCRLEVLAVELSDYHPLKAITVTDSKSRRGGRKGSTSSSSSS
CSSVAPDPLSLTLDGTDPLSLFAAASETPTLPHSISAGELGRKRKEKEEEVGSDFEPWSS
KRGEILSRFTTTEKLSINLFMGSDKSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNL
SQQDYVNRIEELNQSLKEAWGSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGGLVYDRIWSMCADPHPLPESFSADDVNDTAKETCLNWFFKIASIRELVPRLYVEAAI
LKCNRFLTKSGIQETLQRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNFFD
LLASFRQVHGESVQNQLVLQRVEIPIYLTLYSPAIHWILQCVAYRAPEVLLTEMMDRCKK
LGNNALLLNSVMWAFRXEFVAMRATDFIGMIKDCDEAGFPKHLLFASLGRSLSVADPPES
ERLSILNEAWKVITKVRSPRDYINCAEIWVEFTCRHFTKREVNTVLADIIKHITPDRAFE
DAYPQLQSVIKKILTYFHDFSVLFSMEKFLPFLDMFQKDSVRVEVCKSIMEVFIKHQQEP
TRDPVILNALLHICKTMHDSVNALTLDDEKRALSLLINGFIRMVSFGRDFEQQLSFCVEA
RATFCNLEPVIIHLIHTVNQLAMETRRVMKGNHSRKTAAFVRACAAYSFITIPSLTSIFS
RLNLYLLSGQVALANQCLSQADAFLKAAVSLLPEVPRTISIEGKQRSSESFLLDFINNFL
STLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKIRVYISALPLLAAMSQESYLYTI
PKVDSNETLYGGDPKFIAEINKLCETLISQVLDHLKGLGRDEGVRRQGSLAFSLFGCLLA
HGDLRNNKLNQLAVNLWNLSHKHGFCDTRTSVRTLECIKHQAQQADMSHLSDMTARLSLQ
SRA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttcagtggcattctcgggcacgtaaatatgagagtgagttgcatatgtgt
cgtttggaggttttagcagtggagctcagtgactatcatccacttaaagcaatcacggtg
acagattcgaaatctcgccgtggtgggcggaaaggcagcacttcctcctcatcttcctcc
tgtagttctgtggctccggatccactcagcttaacgttggatggaaccgacccactgtct
ctcttcgctgcggcgtctgagacaccaactctcccacacagcatctctgctggggagctg
ggaaggaaacgtaaggagaaagaggaggaagtgggctccgactttgagccgtggtcatct
aaacgtggagagatcctgtctaggttcaccaccacagagaaactgtctataaatctcttc
atgggctcagacaagagtaaagcatccagtcccagctcagcggtgtcagagaaggtgcgc
actcgtctggaggaactggatgacctggaggagggctcccagagagagctcttgaacctg
tcccagcaggactatgtcaaccgcattgaagagctcaaccagtctctgaaggaagcctgg
ggttcagaccagaaagtcaaagccctaaaaatcgtcatccagtgctccaagctgctctct
gatacatcagtaattcagttctaccccagcaagtttgttctcatcacagatatcctggac
accttcggtggtctggtgtatgacaggatctggtccatgtgtgctgaccctcatcctcta
ccagaatcgttctccgctgatgatgtgaatgacacagccaaagagacgtgcctcaactgg
ttctttaaaatcgcctccatcagagagcttgtccctcgattatatgtcgaagctgctatt
ctgaaatgcaaccgcttcttgacaaagtctgggattcaggagacgctacagagactgacc
gcgatgattagaggaataggagatccgctggtggctgtatacgcacgcgcgtatttatgt
agggtggggatggaggtggctccgcatctgaaggacagtctcaataagaatttcttcgac
ctgctggcctcattccgtcaggttcatggtgaaagtgtgcagaatcagctggtgctgcag
cgggtggagattcccatctatctgaccctgtattctcctgccatacactggatcctgcag
tgtgtggcatacagagcgccagaggttctgctaacagagatgatggacagatgcaagaag
ctgggcaacaatgctctcctgctgaactctgtcatgtgggctttccggncagaatttgtc
gcaatgagagcaacagactttatcggcatgatcaaagactgtgatgaagctggatttccc
aagcacctgttgtttgcgtcactgggtcgcagtctgtctgttgctgaccctccagagagt
gagagactctccatactcaacgaagcttggaaggtcatcactaaagtgcgcagtccaagg
gattacatcaactgtgctgagatctgggtggagtttacctgccgtcacttcacaaaacgg
gaggtgaatacggttcttgctgacatcatcaaacacataactccagacagagcttttgag
gatgcatatccacagctgcagtcagtgataaagaagatcctcacatacttccatgacttc
tcagtgcttttctcaatggagaagttcttgccctttctggacatgttccagaaagacagc
gtgagggtggaggtgtgtaaatccatcatggaggtcttcatcaaacaccagcaggaacca
acgagagatccagtcatcctcaacgcactgctgcacatctgtaagaccatgcatgactct
gtcaatgctctaacactagatgatgagaaaagagctctgtccctgctgatcaatggattt
attcgtatggtgtcatttgggagggactttgagcagcagttgagtttctgtgtggaagcc
agggcaactttctgtaatctggagcctgtcatcattcacctgattcatacggtgaatcag
ttagccatggagaccagacgtgtaatgaaaggcaatcactcacgtaaaacggctgctttt
gtcagggcatgtgctgcctacagtttcatcaccattccgtccctcaccagtatcttcagc
cgtctcaacctctatctgctttctggacaggtagcactggccaaccagtgtctgtcccaa
gcggatgcatttctgaaagcagcagtcagtcttttgccagaagtcccacgaaccatcagc
attgagggtaaacagcgatcatctgagtccttcctcctcgacttcattaacaacttcctc
tccacactgcttgtagtgccggatcatccagagcagggtgtgctgtatctggtgcgaggg
ctgttgaatatggtgcaggactacacctgggaggacaacagtgatgccaagatccgcgtc
tacatcagcgctttaccattactagcagcaatgagccaagaaagctatctttataccatt
cctaaagtggattccaatgaaaccctctatggaggagatcccaagttcatcgcagagatc
aacaagttgtgtgagactctgatcagtcaagttctggatcatttaaaggggcttggccga
gatgagggagtgcgcagacagggcagtttggctttctctctgtttggctgtctgttggct
catggtgatctacgaaacaacaaactcaatcagctggctgtcaacctgtggaacctgagt
cacaaacatggcttttgtgacacgcgcacatcggttcggactctggagtgcatcaaacat
caggcgcagcaggcagacatgagccatctctctgacatgacagcacgtctgtctctgcag
tccagagcctga
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