Cyprinus carpio (common carp): 109054411
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Entry
109054411 CDS
T05134
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109054411 (dhx35)
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109054411 (dhx35)
Spliceosome [BR:
ccar03041
]
Complex C
Other components
Complex C specific factors
109054411 (dhx35)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
ABC_tran
AAA_22
FtsK_SpoIIIE
Cas3-like_C_2
AAA_29
AAA_30
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
109054411
NCBI-ProteinID:
XP_042568830
UniProt:
A0A9Q9VPK9
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All DBs
Position
A23:complement(8425230..8440955)
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AA seq
700 aa
AA seq
DB search
MAAPHSTMKFWKPGSEAPGVCEERDLSSETTGSPIIYNPHTALSVEKQRQRLPVFKHRNN
ILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAADGKVIGVTQPRRVAATSVAGRVAE
ERGAYLGHEVGYSIRFDDCSDPHATRIKFLTDGMLVRCCLLSDLLLKKYSVIMLDEAHER
TLYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFHDFFNLNESGDPNKDTCAILTVEGR
TFPVDIFYTVSPVPDYVKATVETVMKIHETEEDGDVLAFLTGQEEVEKVVSMLQEQARTL
SRYGMKKHLCVLPMYAGLPYNEQMRVFERMPPTVRKVVVATNIAETSITINGMVFVIDCA
FVKLRAYNPLTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPE
MQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGLDQYGRLTDPMGV
RMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVAPHNQKKSAARERRKFAVA
EGDHLTMLNVYEAFIKHQKSSQWCQDHFLHYKGLLRAVAVREQLRHLLNKFKVPRTSSEG
DPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDSVLYGEKPPKWVVFNEVVQT
SKYYMRDVTAVESSWLVELAPHFYKQAKHGSLSSKRAKVF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccccactccaccatgaaattctggaaacccggctcggaggctccaggtgtg
tgtgaggagagggacctgagctcggagaccaccggctcccccatcatctataacccccac
acggcgctctccgtcgagaaacagaggcagaggctgcccgtcttcaagcacagaaacaac
atcctgtatctggtggagagcttccagactgtggtgattgttggagaaacaggatctgga
aaaagcacacaaatcccacagtacctgctggaggcgggatgggcggcggacgggaaggtg
atcggcgtgactcagccgcggcgagtggctgccacatctgtggccggtcgcgtggcggag
gagcggggggcatatctggggcatgaggtgggctacagcatccgcttcgatgactgctct
gacccgcacgccacacgcattaagtttctgacggacgggatgttggttcggtgctgttta
ttgtctgacctgctgctgaagaagtacagtgtgataatgctggatgaagctcacgagcga
acgctttacactgacatcgccatcggcctcctgaagaagattcagaagaagcgcagagac
ctgcgtttgatcgtagcttcagccactttggatgccaagaaattccacgatttcttcaac
ctcaatgagtctggagacccaaataaagacacctgtgcgattctgacggtggagggccga
acgttccctgtggatattttctacactgtcagtcctgtgccggactatgtgaaggctacg
gtggaaaccgtgatgaagatccacgagacggaggaggatggagatgtgctggccttcctc
acaggacaggaggaggtggagaaggtggtgtctatgctccaggaacaggcccggactttg
tcccgttacgggatgaagaagcacctgtgtgtgctgcccatgtacgcgggcctgccctat
aacgagcagatgagagtgttcgagaggatgccccctactgtcagaaaggtggtggtcgcc
accaatatagccgagacgtccatcaccattaacggcatggtgtttgtgatcgactgtgcg
tttgtgaagctgagggcgtataatccactcacggcgatagagtccctgatcgttacgccc
atctctaaagcctccgcctgccagagagccgggcgagccgggagaaaccgcgcagggaag
tgtttccggctctacacagaggaggactttgagaagttgcccgagtcgacggttcctgag
atgcagcgctcgaatctggctccggtcatcctgcagctcaaagctctgggcattgacaac
gtgctacgattcagcttcctgtctcctccacctgctcagtccatggtccaggccctggag
ctgctctacgctctcggaggtctggatcagtacggccgtctcacggaccccatgggggtg
cggatggccgagtttcccctcagccccatgtttgccaagatgctgctggaatcaggaaac
ttcggctgctcaaaggagatcgtcactatagcagccatgatgcagatacagaacattttt
gtagcgccgcacaaccagaagaaatcagctgcgcgggagcgcaggaagtttgctgtggct
gagggcgatcatctcaccatgctgaatgtttatgaggctttcataaagcatcagaagagc
tctcagtggtgtcaggatcatttcctccactacaaagggctcctccgggccgtggctgta
cgagagcagctgagacacctcctcaacaagttcaaggtgccgcggacctccagtgaaggt
gatccggatgtgattctcagatgtattgtgtctggtttttttgcgaatgccgcccgaatg
catcactccggctcttacaggactctccgtgatgaccgagagctgtacattcaccctgat
tcagtgctgtatggagaaaagcccccgaaatgggtggtcttcaacgaggtggttcagacc
agcaagtactacatgcgtgacgtgacggcggtcgagtcctcctggctggtggagctggcg
ccgcacttctacaaacaggccaagcacgggtctctgagcagcaaacgggccaaagtcttc
tga
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