Cyprinus carpio (common carp): 109054415
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Entry
109054415 CDS
T05134
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04514
Cell adhesion molecules
ccar04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109054415
04517 IgSF CAM signaling
109054415
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRR_LRWD1
LapA_dom
Motif
Other DBs
NCBI-GeneID:
109054415
NCBI-ProteinID:
XP_042600203
UniProt:
A0A9R0AJ32
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Position
A1:complement(11875241..11892995)
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AA seq
827 aa
AA seq
DB search
MLARIVFICSLFAGASFGDTEPKALYGGACKSLCTCEEKDGQLYINCEDRNISKISDVKV
PSDKPFHLNLYKNDLVELLAEEMDAFKNAVTLHLGANSIQELEPGVFSALGSLRKLHINS
NFLVMLKEDTFHGLVNLEYLQADTNFIRFVEPGAFSKLVRLKVLILNDNSIEFLPSNIFR
FVPLTHLDLRGNKLQTLPYVGFLEHIGRIMELLLEDNDWVCNCEILHLKVWIENMRAQSS
IGEVVCNRPEDLRGTTLTRVKRDLLCPSHADINLEEPSKSLDMIVTPSTKVVQIPNVNDG
TRTPTPANGLGTFCVPMCSCSPQSMGFLMHCEDQDIQRISDIGILEQSPNMLILTGNMIQ
RLFKYDFVTYDSLELLNLANNQIDYIDNETFLSLSNLKKLYLNGNRIEKISVTMFLGLHN
LEYLYLEYNVIKVIEAGSFNPLTNLKLLLLNNNLLNTLPAQIFRNVPLVTLNLRKNIFMH
LPVSNVLDQLNYLEHIYLEDNPWDCTCDLVSLKQWVEKLSKETVVGTILCHTPQKLSTAE
VRNLKHDVLCPGLVTYKSLTGDTKDNSVVTIAPEGGTTGFFRFLTDAVPLSVLILCLLIL
FLTFICCAAGIIVFVLHRRRRQAKKKQVEEQPRESSPIHLHYSMYGQKTTHHVTESQGPG
MYDEPVRSPIIQVCRNPSYCSQHKQYELDEYDSEKPKHICHSILDKESESLLAGPNVKFR
AITDYPTEFVSLGDASSLYKNILERERELQQLSLTEYLRKNISQLQPAVDMQVPNHHKEL
KLMETLVYTRPRKVMVEQTKNEYFELKANLHAEPDYLEVLEHQTTFN
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgctggcccggatcgttttcatttgctccttgtttgctggtgctagttttggagatact
gaacccaaggctttgtacggtggagcttgcaaatctttgtgcacctgtgaagagaaagat
ggacaattgtacataaactgtgaagacagaaacataagcaaaatctcggacgtgaaagta
ccgtcagataaacctttccatttaaatctatataaaaatgacttagtggagttacttgca
gaggaaatggatgctttcaagaacgccgtcaccttacatctcggtgcaaacagcatacag
gagcttgaacctggcgtgttcagtgcactgggatccctgagaaagctgcacataaacagc
aatttcctggtcatgctgaaggaggacacatttcacggtttggttaatttggaatacctt
caagctgacaccaacttcatccggtttgtggagcctggggccttcagcaagcttgtccgt
cttaaagttctgatcctcaatgacaactccatcgagttcctaccaagcaacattttccgc
tttgttcctctgacacatttggatctgcgtgggaacaaactgcagacactcccatacgtg
ggtttcctggaacatattggtcgtatcatggagctcctgttggaggacaatgactgggtg
tgcaattgcgaaatcttgcatttgaaggtctggattgagaacatgcgagcacagtcatcc
attggcgaggtggtttgcaacagacctgaagatcttaggggcacaactttgaccagggtc
aaaagggatttactttgcccctcccatgctgacatcaacctcgaagaaccatcaaaatct
ctagacatgattgtcaccccatccaccaaggttgttcagataccaaatgtcaacgatggc
acaagaacacccacacctgcaaacggcctaggcacattttgcgtgccaatgtgctcttgt
tctccccaaagtatggggtttttaatgcactgtgaggaccaagacattcagaggatatcg
gatataggcattcttgaacaaagcccaaacatgctgattttgacagggaatatgatacag
cgactttttaaatatgattttgtgacgtacgacagtttggaattgctcaatttagcaaac
aaccaaatagactacattgacaatgaaacctttctgagtttgagcaatttgaaaaagctg
tacctgaatggaaataggatagagaaaatctcggtaacaatgtttcttggccttcacaac
ttggaatacttgtacttggagtataatgtcatcaaagtgattgaggctggatcgttcaac
cctttgacaaatctaaagctcctgttgctaaacaacaatctactcaacactctccctgca
caaatatttcgtaatgtgcccttggtgacattgaacctaaggaaaaatatctttatgcac
ttaccagtgagtaatgtgttggaccagctcaattatttggagcatatttatcttgaggac
aatccttgggactgcacttgtgatttggtcagcctcaaacagtgggtagaaaagctaagc
aaggagaccgtggtgggtaccatcttatgccacactcctcaaaaactgtctactgctgag
gttagaaacctgaagcatgatgttctctgtcctggcttggtcacgtataagtccctaact
ggagacactaaggacaatagtgtagtcacgattgcgcctgagggcggcaccaccggcttc
ttccgatttctgacagatgcagtgccactatcggtactcatcctctgccttctcatcctt
tttctgaccttcatttgctgcgctgcagggatcatcgtgtttgtgctacaccgtcggcgg
agacaggccaagaagaaacaagttgaggagcaacctcgcgagagcagtcccatccacctg
cactatagcatgtatggccagaagaccacccaccatgtaactgaaagtcaaggacccggc
atgtacgacgaacctgtccgtagcccaatcattcaagtctgcaggaaccctagttactgc
tctcagcacaaacaatatgagttagatgagtacgatagcgagaaacctaaacatatctgc
catagcattcttgacaaggagagtgaatccctacttgcaggacccaatgtgaagtttagg
gccatcaccgactaccccactgagtttgtgagtttgggagatgcaagctccttgtacaag
aacatcttagaaagggaacgggaactccaacagctcagcctcactgaatatctcaggaaa
aacatatcacagctacaaccggctgtggacatgcaagtccccaaccaccacaaagagctg
aaactaatggagactcttgtttatacaaggccaaggaaggtcatggtggaacagactaaa
aacgagtactttgaactcaaagccaacttacatgccgaaccagactatttagaagtctta
gagcatcaaacgactttcaactga
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