Cyprinus carpio (common carp): 109054417
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Entry
109054417 CDS
T05134
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1
KO
K24885
homeobox-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109054417 (hmbox1b)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109054417 (hmbox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HTH_31
HTH_37
DUF494
HTH_26
Motif
Other DBs
NCBI-GeneID:
109054417
NCBI-ProteinID:
XP_042602241
Ensembl:
ENSCCRG00000049434
UniProt:
A0A9R0AMT4
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All DBs
Position
B20:complement(22349806..22362167)
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AA seq
456 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRHTGMTKPEIVHALNTLERLDREHGDKFGRRGPSDSNAT
NSTTSSTTPTSNNTSNATMATSSTTSTATQTQFHGNLSPSPSNSYATSPPAVLPSPVSLV
AMAQNGRDALAATPNGKLSPNRYPVNSAAAVRSYGLEGSEEDLDIDDKVEELMRRDSTLV
KEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPG
ATLNMRPTPVSLDEMEWRQTPPPISSAPGSFRLRRGSRFTWRKECLAVMESYFSDNQYPD
EAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIATILESHGID
VQSPGGHSNSDDIDANDYNEQGCDVTYFEKRGVNRPFGYYRLEPTSPTQDDAGNHADHQD
PISLAVEMAAVNHSILALSRPGGVASEIKTESLDDD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactacacagatgagccacgcttcactatcgaacagatcgacctgctgcagaga
ctgcggcatacaggtatgaccaaacccgagatcgtgcacgcgctgaacaccctggagcga
ctcgaccgcgagcacggggacaagtttggccggcgcggcccgtcggactccaatgccacc
aacagcaccacctccagcactacacccacctcaaataacactagcaacgccaccatggca
acctcctccaccacctccacagcaacgcaaacgcagttccacggtaatttatcgccgtcg
cccagcaacagttacgccacatctccacccgccgtcttaccctcgccggtctctctggtc
gccatggcgcagaatgggcgggacgctttggcggcgacgcccaatgggaagctgtcgcca
aaccgttacccagtgaacagtgcggcggctgtgagatcgtatgggctggaggggtcagag
gaggacctggatatagacgacaaggtggaggagctcatgaggcgggacagcaccctggtg
aaagaggaaatcaaagcctttctgggcaacagacgcatttcacaggccgtggtggctcag
gtcacaggcatcagtcagagcagaatctctcactggctcctccagcagggctcagatctc
agcgaacagaagaaacgagctttctatcgctggtaccagctggagaagacaacgccaggt
gccacattaaatatgcggcccacccctgtatctctggatgagatggagtggcgtcagact
ccaccccccataagctccgcccctggaagcttccgtctgcgcagaggcagtcgattcacc
tggaggaaggaatgtcttgcggtgatggagagctatttcagtgataatcaatatccagat
gaagccaaacgagaagaaatcgctaatgcctgtaacgctgttattcagaaaccaggaaag
aagctgtctgacttggaaagagtcacatcattgaaagtctacaactggtttgccaaccga
cgcaaagagatcaagaggagggccaatattgccacaatcttggagagtcacgggatcgat
gtgcagagtcccggaggacactccaacagtgacgacatcgacgctaacgactacaacgag
cagggttgtgatgttacctattttgaaaagagaggcgtgaacagaccctttggttactac
cgtctggagcccacctcaccaacacaggatgacgccggcaatcacgcagaccaccaggac
cccatctctctcgccgtggagatggcagctgtcaatcacagcatcctcgccctgtcccgc
ccgggaggcgtggccagtgaaatcaagacagagtcactggatgatgactga
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