Cyprinus carpio (common carp): 109054481
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Entry
109054481 CDS
T05134
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109054481 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
Other domain-containing proteins
Patched domain-containing proteins
109054481 (ptchd4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
109054481
NCBI-ProteinID:
XP_042602716
UniProt:
A0A9Q9XJ33
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All DBs
Position
B20:complement(20587393..20609644)
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AA seq
916 aa
AA seq
DB search
MCFIGRTGASSAASWIWRRMLRQVIHRGLKSSFYWLGLFVSRHPVFFLTVPAVLTIIFGS
TVLSRFKPETDLEILVAPTHSLAKIERSLANSLFPVDQSKHKLYSDLHTPGRYGRLILLA
KSGGNILELAEQVLQVHKKVLDMRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIR
LAVLSNSTFSKVPVSYPNTTLKDGRVSFIGHQLGGVALPANNRDQQVKFARAIQITYYLR
NLGPVVQDIISEKWESEFCKLVHQLATDSQELHIQSLTSFSLWRDFHKTGVLAKSEVLVS
LVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGIPFF
AMGHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTN
IESVKVFCQSMCIAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPT
WFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFM
GCLQINDGSNIINLLASNTPSVSFALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLKT
LGQGFNKISWIDNYFHYLRVVNVSASTKSDFINILKSSFLRSPQYQHFVDDIIFSKNGDE
YDIIASKMYLVARTTEKTREEVVELLEKLRPLSLINSIKFIVFNPTFVFMDRYSSSIISP
ILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVDMDSISILCLIY
TLNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQNTSCFVIGIMPLLFVPSNL
TYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREREREREE
IECIEVRENPDHVTNV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcataggaagaaccggggcatcatctgctgcaagctggatctggaggaggatg
ctgcggcaagtgatacacagagggctgaaatcttccttctactggctgggtttgttcgtg
agcaggcatccggtgttcttcctcaccgtccccgcagtcctgaccatcattttcggatcc
acggtgctgagccggtttaagcccgaaacggatctggagatcctggtcgccccgacgcac
agcctcgccaagatcgagcggagtctcgccaacagcctcttccccgtcgaccagtccaag
cacaagctgtactcggacctgcacacccccggcagatatggcagactcatcctgctggcc
aaatccgggggaaatatcctggaactggccgagcaggtgctccaggtgcacaagaaggtc
ctggatatgcgtgtcaattataaaggcttcaattacactttcgcgcatctctgtgtcctg
agccaccgggacaagagatgcctcctggatgatatcatcaccatattcgaagacattcgc
ttagctgttctgtctaacagcactttttccaaggtccccgtgagctatccgaatacaaca
ttaaaggatggtcgagtgtcctttattggccatcagctgggtggcgtggccttgcctgca
aacaaccgggatcaacaggtcaagtttgctcgcgccatccaaatcacctactacctccgc
aaccttgggccagtggtgcaggacatcatttctgagaagtgggagagtgaattctgtaag
ctggtgcaccagctggctacagacagccaggaactacacatccagtcacttacgtccttc
agcttatggcgggacttccacaagacaggcgtgctggccaagagcgaggtactggtcagc
ttggtgctggtgctcctggcagccaccatctccagctctatgcgggactgtttgcgcggg
aaacccttcctgggcttgttgggcgtccttaccatctgcatcgccaacgtgacggcagct
gggatttttttcatctctgatgggaaatttaactctacgctgcttgggatcccctttttt
gccatgggccatggaacaaagggtgtgtttgagcttctggcaggctggagaagaaccaga
gagagtttgccctttaaggagagagtggcagatgcattcgccgatgtgatggtgtgctac
accatgaccagctcgctctatattatcaccttcggcatgggtgccagccctttcaccaac
atcgaatccgtgaaggttttctgccagagcatgtgtatagcaatcttggtgaactacttc
tatgtattctcattctacggctcctgcctggtgtttgccgggcagctggagcaaaaccgc
tatcacagcgtcttctgctgcaagatcccctcggtggagtatctggaccgccagcccact
tggttcaagaccatgatgagtgatggccacgatttgtctacacaccacgacagtgtaccg
taccagaaccacttcattcagcacttcctgagggagcattacacagaatggattaccaac
acctacgtcaagccgtttgtggttatcctctacctgatttacgcctccttttctttcatg
ggatgtttacaaatcaacgacggctccaacataattaatctgctagctagtaatacgccc
agcgtgtcgttcgccctgacccaacagaaatactttagcaactacagtccggtgattggg
ttttacatctacgaacctattgagtattggaactccacagtacaggagcacctcaagacg
ctgggccagggctttaataagatttcatggatcgataattactttcactatctgagggtc
gtgaatgtcagtgcatcaaccaaaagtgatttcatcaacatcctcaagagttcttttctg
aggagcccacaatatcaacactttgtggatgacataattttttccaaaaacggagacgaa
tacgacatcatcgcgtccaagatgtacttggtggccaggacgaccgagaagaccagggag
gaggtcgtggagctgctggagaaacttcgacctctctccctcataaacagcataaagttc
atcgttttcaacccgacattcgtgttcatggaccgctacagttcctccatcatctccccc
atcctaacatcgggtttcagcgtgctcaccattctcatactcaccttcttcctggtcatt
aacccactggggaatttttggttgatcttgactgtcacctccgtggaactgggtgtcttg
ggtctcatgacgctctggaatgtagacatggacagcatctcaatcctgtgccttatttat
acactcaactttgccatggatcactgtgccccccacctctacacgttcgtactggccact
gagcatacccggactcagtgcatcaagatctctttagaggagcatggggccgccattttg
cagaacacctcgtgttttgtaattgggataatgcctcttctctttgtgccttctaacttg
acctacacactgttcaagtgctcccttctcacggcaggctgcacagtgctgcactgtttt
gtcatcctaccggtgtttttgacattcttcccaccctctaagaagcggcacaagaaaaag
aaacgtgccaaacggaaagagcgggaaagagagagggagcgggagagggagagagaggaa
atcgagtgcatcgaagtcagggaaaacccggaccacgtgaccaatgtttga
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