Cyprinus carpio (common carp): 109054540
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Entry
109054540 CDS
T05134
Name
(RefSeq) speckle-type POZ protein-like B isoform X1
KO
K10523
speckle-type POZ protein
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109054540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109054540
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
109054540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
109054540
NCBI-ProteinID:
XP_042589844
Ensembl:
ENSCCRG00000041053
UniProt:
A0A8C2C9L6
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Position
B11:complement(11121548..11130731)
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AA seq
392 aa
AA seq
DB search
MSRVPTPPPPGEMTSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVVRSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNMLK
VPECQLSDDLGNLWEGSRFTDCSLFVGGQEFKAHKSILAARSPVFNAMFEHKMEESKKNR
VDISDVEPDVFREMMVFIYTGKAPNLEKMADSLLAAADKYALERLKVLCEEALCNSLSVE
NVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHAADIMETAGWKAMI
QSHPHLVAEAFRALASAQCTPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcccacaccccctcccccaggggaaatgacatcaggacctgtggcggaa
agctggtgttatacacaggtgaaagttgtgaagttttcttacatgtggacgattaacaac
ttcagcttctgtcgggaggagatgggagaagtcgtaaggagctcgaccttctcctcgggc
cccaacgacaagatgaaatggtgtttgcgagtgaacccaaagggtctggatgatgagagt
aaagattatctctctctgtacttattgcttgtcagttgcccaaaaagtgaagtgagagca
aagttcaagttttctttactgaacgccaaaagagaagaaactaaagccatggaaagccaa
agagcctaccgcttcgtccagggaaaggactggggcttcaagaagttcatcaggagagat
ttcttgctggatgaagctaatggacttcttcctgatgacaagctcactctgttctgtgag
gtgagtgtggtccaagactctgtaaacatctctggccagtcgaacacaaacatgctgaag
gttccggagtgtcagctttctgacgacctggggaacctgtgggaaggctccaggtttaca
gactgcagcttgttcgtgggagggcaagagttcaaagcgcacaaatccatactggcagcg
aggtcacccgtattcaatgccatgtttgaacacaaaatggaggagagtaaaaaaaaccgt
gtggacatcagcgatgttgaaccggatgtatttagggaaatgatggtatttatttacact
ggtaaagctcctaacctggagaaaatggcagacagcctgttagctgctgcagacaagtac
gctctggaaagattaaaggtattatgtgaggaggctctctgtaacagtttgtctgtagag
aatgtggctgacatcctcatcctggctgacctgcacagcgcagagcagcttaaagcacaa
gccatagacttcattaatagatgcagtgttcttagacagctgggctgtaaagatgggaag
aactggaatagcaatcatgccgcagacataatggagaccgcaggttggaaagcgatgatt
cagtcccatcctcacttagtggccgaggcattccgggctctcgcttcagcccagtgcacc
ccttttggtctgcctaggaaacggctaaaacagtcctga
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