Cyprinus carpio (common carp): 109054569
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Entry
109054569 CDS
T05134
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109054569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccar02000
]
109054569
03037 Cilium and associated proteins [BR:
ccar03037
]
109054569
Transporters [BR:
ccar02000
]
Other transporters
Pores ion channels [TC:
1
]
109054569
Cilium and associated proteins [BR:
ccar03037
]
Other cilia and associated proteins
Stereociliary proteins
109054569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
109054569
NCBI-ProteinID:
XP_042617270
Ensembl:
ENSCCRG00000005177
UniProt:
A0A9Q9YCI9
LinkDB
All DBs
Position
A7:complement(8252816..8279571)
Genome browser
AA seq
1236 aa
AA seq
DB search
MSEMAEPATITRPLISSKRHKSIRKNSRRIYSPYQDDNGPSDDEDKDGERVDSNDPEELF
QNIQVQKEIITNIRTKPWPIRRKLKVLKQAREIVLKYEGRLTRTRGYQAAGADLLKKISR
VLYNIVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLAG
APFGTTRSKTIPKEHLTSAQDLDTIWSLGGYLQYSVLFYGYYGNVRKIGSAGYRLPLAYF
LVGMAVFAYSFITLLRKMAKNSRMSLAGASNENYTFCWRVFCAWDYLIGNPEAAESKGAA
IVNSIREAIVDEQEKKKDTSLAVLISLRILANILVLMSLTGSIYIIYFVVDRSQKLEQEK
PELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSLI
IALLDKVNSMSSAISVGPGNLSDSTSFLATISQSTEDNLSTIIPDITEQQNSTLTMTLLE
INNSMTTIKSTTSSRQPMRMQSLLNQTVLYEYNTRSQQDPCWETYVGQVLGQVLSVPVLA
YWDFPGLHTCLEDMNEPFIGTSHRIFTYYVHNCSKVRVLLGDTDGLRRGKIASYSRKVNA
GCLLCLSYLQEMLKLSIIDMIFTVASILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFK
IAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFKASRS
NNFYLAMLLFMLFLCMLPTIFAIVRYRPSQYCGPFSGQEKIYDIISETIANDFPLWFSKV
MNYVTSPVVVLPALLLLFMLIYYLQSIARSLKVTNSQLRLQLQTERTDDKKKVFQLAAAR
LQGPEGGDKKPEQESDITSMESSARSASPPRRNGSIANFESPVRHGNSIRTITQSASRPD
IPRAAGASQSPTVPVRQKHKSEPMASSSFRMYSNPSVPQRQVRRVEYIPIRHSGYLGSTS
GSCRSKSHHNMAYNPCTRYAENIHSDPLFRKTLRPMHTEPAVITAQSYVGHRARSTRYVI
VNEHEARKKLMHSKTRLPRHYRLADEPTEIVELYPRNVKCYIPRPPHRSHQPHLSEEEEE
EDPKSSTKRGSLRQPKRPRPPSDLHQTARFYIGDTINSQLSMGQGLYGDEEEDDQEEDWV
NDPQTNIRGPESAHRCGEPYVKPKTKHKVEPSLTESDSASLASSSDQQNSSTDQYIQVIH
NKKKYLKSSAKLTKTKSKSSVKLNVPGTNDLVCSNV
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatggcagaaccagcaactataaccagacccctgatatcctccaagcgacac
aagagcataaggaagaattctagaagaatttattccccatatcaggacgataatggacca
tctgatgatgaggataaggatggagaaagagtggacagcaatgatccagaggagttattt
cagaacattcaggttcagaaggaaatcatcaccaacatccgaactaaaccctggccaata
agacgcaagctaaaagtgctcaagcaagctagagagattgttctgaagtatgagggcaga
ctgaccaggacgagaggttaccaggcagctggggcagatttgctgaagaagatttcaaga
gtcttgtacaacattgttgtcttgttcattccctgggagatgaggattaaaaagattgaa
agtcactttggatcaggtgtggcctcttatttcatatttctgcgatggctgtttgggatc
aacatagttctcactattatgactggagcctttatcgtgctgcctgagctcttggccggc
gctccgtttggtaccacccgcagcaagaccatccccaaggagcaccttacctctgcacaa
gacctggacaccatctggtcgctggggggatatcttcaatactctgtgcttttttacggc
tactacggcaatgttcgtaaaatcggcagtgccggctacagactgcccttggcctatttt
ctggttgggatggccgtttttgcctacagcttcatcactttgctaagaaaaatggctaaa
aactcccgcatgagtttagccggagcctctaatgagaattacaccttctgctggcgtgtc
ttctgtgcgtgggactacctgattgggaacccagaggcggctgagagtaaaggggcggcc
atcgtcaatagcattagagaggccattgtagatgagcaagagaagaagaaagacacaagc
ctagctgtactgatcagtttaaggattctggcaaacattctggtcctgatgtctctgacc
ggcagcatctacatcatctactttgtggtggatcgttctcagaaactagaacaggagaaa
cctgagctaacactctgggagaagaatgaggtgagtgtggtggtgtccctcatcacaatg
attgctccttcagcctttgagttagtggctcagttggagatgtaccaccccagaacgagt
ctccgcttccagcttgccagagttctggtgttgtaccttggaaacctctacagtttgatt
atagccctcctggataaagtcaacagtatgagctctgctatttctgtgggtccaggaaac
ctgtctgactcaacatcattcctagcgacgatttcccagtctactgaggacaacctgtcc
accatcatcccagacatcacagagcagcagaacagcacactgaccatgactcttctggag
atcaacaacagcatgaccaccatcaagagcaccacatcctccagacagccgatgagaatg
cagtctctgcttaaccagaccgtcctctatgaatacaacaccagatcacagcaggacccc
tgctgggaaacatatgtcggccaggtacttggccaggtgctctctgttccagttttagct
tattgggactttcctggtctccacacctgcctggaggatatgaatgaacccttcataggc
actagccatagaattttcacatattatgtacacaactgttcaaaagtgagagtcctgctt
ggagatactgatggtctgcggaggggtaaaattgcatcctactcaaggaaggtaaatgca
ggctgtttattgtgtctatcttatttacaggagatgttaaagctctccatcattgatatg
atcttcacggtggcaagtatcctgctcattgatttcatccggggactggtggttcgatac
ttgagtgactgctgctgttgggacttggagagcaagtttccagaatatggtgaatttaaa
atagcagaaaatgttcttcatctgatatacaaccaaggaatgatatggatgggagcgttc
ttttcaccctgtctgcctgcctttaacgtcctgaagctcattggcttgatgtacctacgg
agctgggctgtgctgacctgtaatgttccccatcagcaggtctttaaggcctccagatca
aataacttctatctggcgatgcttctcttcatgcttttcctctgcatgttaccgaccatt
tttgccattgtgaggtatcggccgtctcagtactgtggacccttcagtggccaggagaag
atttacgacatcatctccgaaaccattgccaatgacttcccactgtggttcagtaaagtg
atgaattacgtcaccagtcctgtggtggtgctgcccgctttgcttctactcttcatgctg
atctactacctccaatccatcgctagatcactcaaagtcaccaacagccagctgagactg
cagctgcagaccgagcgcacggacgacaagaagaaagtatttcagttagctgcagcgcgt
ctgcagggacctgagggtggtgataaaaagccggaacaagagagcgacattactagtatg
gagtcatccgcccgctccgcctctcctccacgccgcaacggcagcatcgccaactttgaa
tctcctgttcgccatggcaacagcatccggaccataacacagtcggcttcacggcctgac
atccctagagctgctggagcgtcacagagccccactgtccctgtgcggcagaaacacaaa
tcggagcccatggccagtagttctttcagaatgtacagcaacccctcagttcctcaaaga
caagtacgacgagtggagtacatacccatcaggcattctgggtacttgggcagcaccagt
ggttcctgccgttccaagtcccaccacaacatggcctacaacccgtgtacacggtatgct
gaaaacatccattccgatccactgtttcggaagacccttcggcccatgcacactgagcct
gctgtaatcacagctcagagctacgtgggccaccgggcacgttcgacgcgttacgtcatc
gtcaacgaacacgaagctcgcaagaagctcatgcactcaaaaacacgcctaccgagacat
taccgcctcgcagatgaaccaacggagatcgtagagctttatccacgtaacgtgaagtgt
tacattcctcgtcctcctcatcgaagccaccagccacacctcagcgaggaagaggaggag
gaagatccgaagagcagcacgaagagggggtcattaagacagccgaaacgtccacgacca
ccgtcggatctccatcagaccgcgcgattctacattggcgatacaataaacagtcagttg
tctatggggcagggtttatacggcgacgaagaagaggatgatcaggaagaagactgggtg
aacgaccctcagacaaacatccgaggtccagagtcagctcacaggtgcggcgaaccatac
gtcaagcctaagaccaagcataaagtggagccgtctctgactgagtcggattcggcatcg
ctggcgtctagtagtgaccaacaaaacagcagcacagaccagtacatccaggtcattcac
aacaaaaagaagtacctgaagtccagcgccaagctgaccaaaacaaaatccaagagcagt
gttaaactaaatgtgcctggcactaatgatcttgtctgctccaacgtttaa
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