Cyprinus carpio (common carp): 109054588
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Entry
109054588 CDS
T05134
Name
(RefSeq) target of rapamycin complex subunit lst8-like
KO
K08266
target of rapamycin complex subunit LST8
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04136
Autophagy - other
ccar04140
Autophagy - animal
ccar04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109054588
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109054588
04136 Autophagy - other
109054588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109054588
Membrane trafficking [BR:
ccar04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
109054588
mTORC2 complex
109054588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_NWD2_C
Hira
Beta-prop_IFT122_2nd
TAF1C_beta-prop
Beta-prop_WDR75_2nd
DUF5854
PEP5_VPS11_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
109054588
NCBI-ProteinID:
XP_018927383
Ensembl:
ENSCCRG00000019540
UniProt:
A0A8C1XX21
LinkDB
All DBs
Position
B12:10987047..10991496
Genome browser
AA seq
326 aa
AA seq
DB search
MNVNQGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAT
GYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQ
CQRIFQVNAPINCVCLHPNQAELIVGDQSGVIHIWDLKTDHNEQLIPEPDVSVNSVHIDP
DASYMAAVNSSGNCYVWNLAGGIGDEVTQLIPKTKIPAHKRYSLRCKFSPDSTLLATCSA
DQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVE
TGEIKREYSGHQKAVVCLAFNDSVLG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaatcaaggcaccgtcggcagtgatccggtgatactcgccaccgctggatat
gatcataccgtcaggttctggcaggcgcacagtggcatctgcacgagaaccgtccagcac
caggactctcaggtaaattcccttgaagtgacacctgataggagcatgatcgctgctact
ggttatcaacacatacgcatgtatgacttaaactccaataatccaaaccctgtgatcaat
tacgacggtgtcagcaagaacatcacgtctgttggctttcacgaggacgggcggtggatg
tacacgggtggagaagactgcatggctcgcatttgggacttgaggtcaaggaatctacag
tgccaaagaatatttcaagtcaatgcacctattaattgtgtgtgtcttcatcccaatcag
gctgaattaattgttggggaccaaagtggtgttatccatatctgggatttaaaaacagac
cacaatgaacagctcatcccagagccagatgtgtccgtcaattctgtccatatcgatcct
gatgccagttatatggctgcagtcaacagctcgggcaactgttatgtgtggaatttggcc
ggaggaatcggcgatgaggtgacacaactgatacccaagacaaagatccctgcccacaaa
cgctactcattacgctgcaagttcagcccagactccacattgttggccacatgctctgct
gaccagacctgtaagatctggagaacctccaacttctctctgatgacagagttgagtata
aagagtaacaacccaggagagacgtcccgaggctggatgtgggattgtgccttctctgga
gattcacaatacatagttacagcctcctcagataaccttgcacgtctgtggtgtgtggag
actggagagatcaaacgggagtacagtggccatcagaaggccgtggtgtgtttggccttc
aatgacagtgtgcttggatag
DBGET
integrated database retrieval system
