Cyprinus carpio (common carp): 109054883
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Entry
109054883 CDS
T05134
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109054883
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
General mRNP proteins
109054883
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
109054883
NCBI-ProteinID:
XP_042586010
Ensembl:
ENSCCRG00000006010
UniProt:
A0A8C2BAQ6
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Position
B8:complement(20574008..20587079)
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AA seq
525 aa
AA seq
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MADDFDVEAMLEAPYKKGESKSSGADGHNEERSKKKRRSGSRSPSPGHRRSRSGGLKKSR
EQRRSRSRERKRSRSKEHKRSRSRSKDRGGRYRGRKSPFMGPKLNGGPGGKTGPPHFPKH
SRRRSRSRSPFKKDKSPVRQPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVR
DVRMISDRNSRRSKGIAYIEFVDSTSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAS
MLQRGGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFAD
AECAKKALDQLNGFELAGRAMKVGHVTERSDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPAAAKQALQMSGSVAFGNLANASTTQHLVPNPGMNQAMNLPSQPLATHC
LQLSNMFSPQAENDPGWDLEIKDDVIEECRKHGGIVHIYVDKNSAQGNVYVKCPTIPVAM
AVVGALHGRWFAGKMITAAYVPLPTYHNLFPDAATATEPLRPMHR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacttcgacgtcgaggccatgctggaagcgccttataagaagggtgaaagc
aagtcctctggcgcagatggtcataatgaggaacgcagcaaaaagaaaagacgtagcggc
agtcgtagtccgagcccaggtcaccggaggagtagaagcgggggcctcaagaagagccgc
gaacaacgcaggagccgtagccgcgagcggaaacgttcacggagcaaagaacacaagcgg
tcgcgatcccgcagcaaggatcggggtggacgttatcgtggacgcaaaagcccctttatg
gggccgaaattaaatggtggtcctggagggaagaccggcccaccgcatttccccaaacac
agtcgcaggcgctctcggagcagaagcccatttaagaaggacaaaagccctgtcaggcaa
ccgatagataatctgagcccagaggagagagacgcccgcacagtgttctgcatgcagctc
gctgccagaattagacccagagatctggaagatttcttctctgcagtgggaaaagtccgt
gacgtaaggatgatctcggatagaaactctcggaggtcgaagggcattgcatacattgag
tttgtggattcgacatcggtaccgctggcgatcggcctgacggggcagagggttctggga
gtgcctattatagtccaggcttcacaggctgagaagaacagggcggcagccatggccagc
atgctccagagaggcggtgcaggacccatgcggctctatgtgggctccctgcacttcaat
ataactgaagacatgctcaggggcatttttgagccatttggaaagattgagggcatccag
ctaatgatggacagtgagactggcaggtcaaaaggatacggattcatatcatttgcagat
gcagaatgtgctaaaaaagccctggatcaactaaatggtttcgagcttgcagggagggca
atgaaggtgggtcatgttaccgagcgttcggatgcctcgtctgcaagctccttcctggac
agtgatgaactggagagaactggcattgacttgggcacaacaggtcgacttcagctgatg
gcaagactcgcagaaggtacaggactgcagattcctgctgctgctaagcaggccttacag
atgagcggctctgtggcatttggaaatctggcaaatgcctcaaccacacaacatcttgtt
cccaatcctgggatgaaccaagctatgaaccttccaagtcagccacttgctacgcactgc
ttgcagctctccaacatgttcagtccacaggcggaaaacgatccaggctgggacctggag
ataaaagatgatgtcatcgaagagtgcagaaaacatggaggcattgttcacatatacgtc
gacaagaactctgctcaaggaaatgtttatgtgaagtgtccaaccatcccagtagcaatg
gctgttgtaggcgccctgcatggtcgctggtttgcaggtaaaatgatcacagctgcctac
gtgcctctccctacctaccataacctgtttccagatgctgccacagccacagagcccctg
aggcccatgcaccggtga
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