Cyprinus carpio (common carp): 109055044
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Entry
109055044 CDS
T05134
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109055044
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109055044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
109055044
NCBI-ProteinID:
XP_042629264
Ensembl:
ENSCCRG00000010320
UniProt:
A0A9Q9YZI6
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All DBs
Position
A16:complement(23088868..23101654)
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AA seq
665 aa
AA seq
DB search
MTCCETMTLRSVTRDLLHRQIQENRALDFQRHYHVTDPFIKRLGLEAELQGHTGCVNCLE
WNERGDLLASGSDDQHAIVWDPFRHTKLITMHTGHAANIFSVKFLPHSEDRILITGAADT
KVHVHDLTAKETTHMFSDHTNRVKRIAAAPMWPNTFWSAAEDGFIRYGDFQLRFRRLVLL
IDLTEYCGQLVEAKCLAINPRDNNYLAVGANGPFVRLYDIRMIHNHRKSLGQSASAGVHT
FCDKQKSIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQRPYTFLLPKKCHTSSEVQNGKTTNGVSNGIHLPASRLKLAKVSSDLPPHLERI
KQQANDAFARQQWTRAIQLYSLGIHEAGHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKA
LSLNPAHLKAHFRLARCLFELKYIAEALECLDDFKGKFPEQAHSSACDALDRDIKAALFS
KADSAEDKKGNSAVRFHSFSRKESIPEDEIVLRERSFDYKHRYCGHCNTTTDIKEANFFG
RSVYSKHWLFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPVVRLWSPRPES
EEKENGRVVEDMESAAQANQRRMNADPLEVMLLNMGYRITGLSSRGTEGSDDEESSESQV
QCRSS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgctgtgagaccatgaccctgcggagcgtcacgcgtgatctcctgcaccgccag
atccaggagaaccgggctctggacttccagagacactatcatgtgaccgacccgtttata
aagcgtctggggctggaggccgagctacagggtcacaccggctgcgtcaactgtctggag
tggaatgagagaggagacctcctggcctcgggttcagatgaccagcacgccatcgtctgg
gatccgttccggcacaccaagctcatcactatgcacacgggacacgcagccaacatcttc
tcagtgaagttcctgcctcactccgaggaccggatcttgatcacaggagccgccgacacc
aaggtgcacgtgcacgacctgacggcgaaggagaccactcacatgttctcagaccacacc
aaccgcgtcaagcgcatcgcagcggctcccatgtggcccaacaccttctggagcgcggcg
gaggacggcttcattcggtacggagactttcagctgcgcttcagacggttagtgttgtta
atcgatctgacggagtattgtgggcagctcgtggaagccaaatgtctggccatcaaccct
cgtgacaacaactacctggctgtgggagccaacgggcccttcgtccggctctacgacatc
agaatgatccacaatcacaggaagtctttgggtcagagcgcctcagccggagttcacacg
ttctgtgacaagcagaagtcgataccggacggcgcgggacagtactacgtggcagggcac
ttgccggtgaagcttcctgattataacaacagattacgagttctggtggccacctacgtc
acgttcagtcctgacggcaccgagctgctggtgaacatgggtggagagcaggtgtattta
tttgatctgacgttcaaacagaggccgtacacctttctgctgcccaaaaaatgccacaca
tcatcagaggtacagaatgggaagacgaccaacggtgtgtccaacgggattcatcttccc
gccagccgcctcaaactggctaaagtctccagtgatcttcctcctcatctggagcggatc
aagcagcaggctaacgatgcgttcgcgcgccagcagtggactcgagccatccagctctac
agtctgggcatccatgaggccggacacaacgccatgctgtacggaaaccgcgccgccgcg
tacatgaagagaaagtgggacggagatcactacgacgcgctgcgtgactgtctgaaggcc
ttgtctctgaacccggctcatctgaaggcacacttccgtttagcacgctgcctgttcgag
ctcaagtacatcgccgaggctctggagtgtctggacgacttcaagggcaagtttccggag
caggcgcacagcagcgcatgtgacgcgctcgacagagacatcaaggcggccctcttctct
aaagcagattcagctgaggacaagaaggggaacagcgccgtgcgcttccatagcttcagc
cggaaggagtccatcccggaggacgagatcgtgctgagagagcggagcttcgactacaag
catcgctactgtggacactgcaacaccaccacagatattaaagaagccaacttcttcggg
aggtcagtttactcaaaacattggttatttatctgggagaaagagacgacgaacctggtg
cggatcttacagggggacgagtctatagtgaactgcctgcagccgcaccccagctactgc
ttcctggccaccagcggcatcgaccccgtggtgcggctctggagccccagacccgagtcg
gaggagaaggagaacggtcgggtcgtggaggacatggagagcgccgctcaagccaaccag
agacgcatgaacgcagatccgctggaggtgatgctgctgaacatgggctaccgcatcacg
ggtctgagcagccgcggcacggagggctccgatgatgaagagagctcggagagccaggtt
cagtgccgctccagctag
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