KEGG   Cyprinus carpio (common carp): 109055161
Entry
109055161         CDS       T05134                                 
Name
(RefSeq) probable flap endonuclease 1 homolog
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03030  DNA replication
ccar03410  Base excision repair
ccar03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109055161
   03410 Base excision repair
    109055161
   03450 Non-homologous end-joining
    109055161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccar03032]
    109055161
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109055161
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109055161
DNA replication proteins [BR:ccar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109055161
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     109055161
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109055161
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109055161
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc XPG_I_2
Other DBs
NCBI-GeneID: 109055161
NCBI-ProteinID: XP_042573940
UniProt: A0A9Q9ZUA8
LinkDB
Position
B2:11014277..11018872
AA seq 350 aa
MGITKLANLIDFDASESIRNKEIGDYSGKIIALDTSIVVNQFRSALPSHLKLSPLTGLFY
RTLTFLEHDIKPVFVLDGRPPDQKRAVLEKRAQSTGWNSLHSSNTVSNFKQDCLRLLHLM
GVPCIKAPGEAEALCAHLVKSGTVNAVASEDMDTLAFGGTVLLRQLNAKRDSEVTEYSLP
KLLKALQLTYIEFVDLCILLGCDYCEKIGGLGPRRALKLIKQHRTIEGVMEHVNRKTHPI
PPNWQYKDARKLFFETPKIDDPVLAWSEPDEEGLVQFLGEKRLLKEEKVRGRMKKFRESL
LKRRKKREVDEKMGQTRQSRLEEFFPAARRRKAVSAAVEASSGRKRSKMK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggggattacaaagttagcgaatctaattgattttgacgcgtcagagtctatacgcaac
aaagagatcggcgattattctgggaagatcattgcactggatacatctattgtggtgaat
cagtttcgctcggctctccccagtcatctgaagctaagccctctcacaggcttgttttac
cgcactctcactttcctggagcatgacatcaagcctgtctttgttcttgatggcagacca
cctgatcaaaagagagctgtgctggagaaaagagctcaaagcacaggctggaacagctta
cacagctccaacacagtgtccaactttaaacaggactgcctgcgtctcctgcacctcatg
ggtgtgccatgcatcaaggctccaggtgaagcagaagcgctgtgtgcccacctggtcaaa
agtggcacagttaatgctgtagcttcagaggatatggacacgctggcgtttggagggact
gttctgctccgccagctcaatgcaaagagagacagtgaggtcacagagtactccttacca
aagctattgaaagctctacagctgacatatatagagtttgttgacctgtgtatcttgctg
ggctgtgactactgcgagaagatcgggggtcttgggccgaggcgagcactgaagcttatt
aaacaacaccgtacaatagagggtgtgatggaacatgtcaacagaaagacacacccaatc
cctccaaactggcagtacaaggatgcccgcaagctgttttttgaaaccccaaaaatcgac
gaccctgtcctggcctggagtgagcctgatgaagagggtctggtgcagttcctgggcgaa
aagaggcttttgaaggaagaaaaggtgcgtggacgcatgaagaagtttcgtgagtctctc
ttaaagagaagaaaaaagagggaggtggatgagaaaatgggccaaactagacagtcacgt
cttgaagaatttttccctgcggcacggaggagaaaggctgtgtctgcagctgtggaagca
tccagtgggagaaagcgatcaaaaatgaaataa

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