Cyprinus carpio (common carp): 109055200
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Entry
109055200 CDS
T05134
Name
(RefSeq) autophagy-related protein 13-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04136
Autophagy - other
ccar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109055200
04136 Autophagy - other
109055200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109055200
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109055200
Membrane trafficking [BR:
ccar04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109055200
Atg1 complex
109055200
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109055200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109055200
NCBI-ProteinID:
XP_042616341
Ensembl:
ENSCCRG00000010356
UniProt:
A0A9R0B1D7
LinkDB
All DBs
Position
A7:complement(22758598..22770323)
Genome browser
AA seq
535 aa
AA seq
DB search
MDSDLSSQDRKDLDKFIKFFALKAVQVIVQARLGEKISTCSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKYDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLTGLGEGFQSVRVGVVGTPI
GTITLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPFTNMAHMHPCSYRAPGEDEGG
TYAGIEDSQEVCTTSFSTSPPSQCVCTVSQAHFKTPRPTLMATLKVPLMGLGISQQLYSS
RLSYQTPALGTVDLCHPTACTAAAHPHQMVVPGKEGGVPQVPAQPNHGTAAEHGRIPSCP
NGQSPQPAQPTSCSSEVKTVFCDALETTFTRKVGAFVNKATTQVTTTSLDLPFAAFAPRA
YDLEVNDPMVHPPPSPAPSSPLQGSLHSNSSSHSGGQPQDDFVMVDFKPAFSKDDLLPMD
LGTFYKEFQNPPQLASLSIDVSAQSMAEDLDSLPEKLAIYEKNIDEFDAFVDTLQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgatctcagctcacaggacaggaaagacttggataaattcatcaaattcttt
gccttaaaggcagtgcaagtcatagttcaagcccggcttggagagaagatcagcacttgc
tcctcttcatcaccgacagggtcagactggtttaatctggcaataaaagacatcccagag
gtgactcatgaggccaaaaaagctcttgctggacagctgcctggcatcggccgatccatg
tgtgtggagatctccctcaaaacctcagagggagactccatggagctggagacgtggtgt
ttggaaatgaatgaaaagtatgacaaggacattaaagtgtcctatacagtttataatcgg
ctgtctctgctgctcaagtctttgctggccatcacaagggtgacacctgcttacaagctt
tcacgtaaacaagggcatgattatgtcatactctacaggatctattttggagatgtccag
ctgacaggtctcggggaagggttccaatcagtgcgagtgggtgttgtaggcactcccata
ggcaccatcactttgtcctgtgcatatcgcactaatttggccctcatgtcttcaaggcag
tttgagaggacaggccctatcatgggtatcatcattgatcattttgtggagcgtcccttc
actaatatggcacacatgcatccctgcagttacagagcgcctggagaagatgagggaggg
acttatgcaggaatagaagactctcaggaggtgtgcaccacgtccttttccacctcccca
ccatcacagtgtgtgtgtactgtaagtcaggcacattttaagacacctaggccgactctg
atggccacactgaaggttcccctcatggggcttggcatctcacagcaactttacagctct
cgtctgtcatatcagactccggccctgggaactgtggatttgtgccatcctacagcttgt
actgctgctgcacatcctcaccagatggttgtgccgggtaaagaaggtggagtcccacag
gtgccggctcagcctaatcatggcactgcagctgagcatggtcgtatcccatcatgcccc
aatggacagtcgcctcagccggcacagcccacatcctgtagtagtgaggtgaagactgtg
ttctgtgatgctctagagaccaccttcaccaggaaagtcggtgcttttgtcaacaaagcc
accactcaggtgacaacaaccagcctggatcttccttttgctgcattcgctccaagagcc
tatgacttggaggtgaacgacccaatggtgcaccctcctccatccccagctccttcgtct
cccttgcaaggcagcctgcactcaaacagctcgagccacagcggaggacagccacaagac
gactttgtcatggttgactttaaaccagcattctctaaggatgatcttttgccaatggat
ctgggaactttctataaagagtttcaaaaccctcctcaacttgcaagcctgtccatcgat
gtcagcgctcagtctatggctgaggatttggattctcttccagagaaactggccatttat
gagaagaacattgatgagtttgatgcgtttgtggacacgctacaatag
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integrated database retrieval system
