KEGG   Cyprinus carpio (common carp): 109055292
Entry
109055292         CDS       T05134                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109055292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109055292
Spliceosome [BR:ccar03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109055292
 Complex B
    109055292
SSDB
Motif
Pfam: RRM_1 Transformer RRM_occluded RRM_7 Dsh_C
Other DBs
NCBI-GeneID: 109055292
NCBI-ProteinID: XP_018928061
Ensembl: ENSCCRG00000007404
UniProt: A0A9Q9V0N5
LinkDB
Position
A16:4609014..4614361
AA seq 478 aa
MSDFDEFERQLTENKQADRDKENKHHRCSGSRSRSRDQDRKRRSRDRERRGSSRDRHGDS
KDRRHRRSRSPHREKKKIKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPE
GLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLA
VQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPG
TSLFCSPNSCVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGL
SKGYAFCEYVDVNISDQHTSQAIAGLNGMQLGDKKLLVQRASVGSKNTTLTGINQTPVTL
QVPGLVNSSMNQMGGIPTDVLCLMNMVAPEELLDDEEYEEIVEDVREECSKYGQVKSIEI
PRPVNGVEVPGTGKIFVEFMSVYDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtcagattttgacgagtttgagagacagctgaccgaaaacaagcaagcagacagagac
aaggagaacaagcaccaccggtgcagtggctcaagaagtcgcagcagagaccaggacagg
aaaaggaggagccgggacagagaaaggagaggcagcagccgagatcgtcatggagacagc
aaggaccgcagacacagacgcagtcgctctccacaccgtgagaagaaaaagattaaagtg
aaaaaatattgggatgttcctcctcctggatttgaacacatcacacccatgcagtacaaa
gccatgcaggctgctggtcagatcccggccactgctctgctgcccacaatgacccctgag
ggtctggctgtgactccaacacctgttcctgtcgtgggcagtcagatgactagacaggcc
cgaaggctttacgtcggcaacatcccatttggcatcacagaggagtctatgatggacttc
ttcaatgctcaaatgcgtttaggtggcctgactcaggccccaggtaacccagtccttgct
gttcagattaatcaggacaagaattttgccttcttggagttccgttcggtggatgagaca
acacaggccatggcatttgatggcatcattttccaaggacagagtttaaagattcgccga
ccacacgactaccagcctctgccaggcatgagtgaaaaccccagtgtctatgtcccaggc
acgtctctcttttgctcccccaattcttgcgtcgtctccacggtggtgcctgattcggcc
cataaactcttcatcggcggtctgccaaattacctcaacgatgaccaggtcaaggaattg
ctgacgtcgtttggccctctgaaggcctttaatttggtgaaagacagtgcaacaggcctc
tctaagggctatgccttctgtgaatatgttgacgtcaatatcagtgaccagcacacttct
caggccatcgctggactaaacgggatgcagctgggggacaagaagctcctggtccagaga
gcaagcgtcggctccaagaacaccacactgactggtataaaccaaactccagttaccctt
caagtcccaggtctcgtaaacagctcaatgaatcaaatgggcggcattcccacagatgta
ttgtgtctgatgaacatggtggctccagaggagctgctggatgatgaagagtatgaggag
atcgtggaagatgtcagagaagagtgctccaaatacggccaggtcaagagcatagaaatc
ccgcgtcctgtcaacggcgtggaagttcctggcactggaaagatcttcgtggagtttatg
tcagtgtatgactcccagaaggcaatgcaaggcttaacaggaaggaaattcgccaacaga
gttgtggtgactaaatactgcgaccctgatgcctaccaccgccgtgacttctggtag

DBGET integrated database retrieval system