Cyprinus carpio (common carp): 109055327
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Entry
109055327 CDS
T05134
Symbol
smarca4a
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109055327 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109055327 (smarca4a)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109055327 (smarca4a)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109055327 (smarca4a)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109055327 (smarca4a)
Chromatin remodeling factors
BAF complex
109055327 (smarca4a)
PBAF complex
109055327 (smarca4a)
GBAF(ncBAF) complex
109055327 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SnAC
Helicase_C
HSA
Bromodomain
BRK
QLQ
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
109055327
NCBI-ProteinID:
XP_042585651
UniProt:
A0A9R0A6I3
LinkDB
All DBs
Position
A3:complement(30809491..30831829)
Genome browser
AA seq
1633 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHGMMGPSPGPPSSGHPLPPQG
PSGYPQDNMLQLHKPMEGMHEKVIPEDQRYAQMKAMGMRPGGHSGMGPPPSPLDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPAGSGAMEGGDPQVMGQQNRSVGAGGVAVSGPSGG
PPNAGGPGGAGGPTPFNQNQLHQLRAQIMAYKMLARGQALPDHLQMAVQGKRPMPGMQQG
MPNMPPASGQGAGPPGPGGPVPGGPNYNRPHGMVGPNMPLPGPSGVPPGLQGQPTNGPPK
SWPEGPMVNAAAPASAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPTQPPMV
LHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKANIEL
KALRLLNFQRQLRQEVVVCMRRDTALETALNGKAYKRSKRQSLREARITEKLEKQQKIEQ
ERKRRQKHQEYLNSILQHAKDFKEFHRSITAKIQKVTKAIATYHANTEREQKKENERIEK
ERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKDKKKKK
KKKKPENAESGALALGPDGEPLDETSQMSDLPVKVIHIDSGKILTGMDAPKAGQLDAWLE
VNPGYEVAPRSDSEDSGSEEEEDEEEEQSQPSQSSSEEKKIIPDPDSEDVSEVDVRHIIE
HAKQDVDDEYGNAAFVRGLQSYYAVAHAVTERVERQSSLLINGQLKQYQIKGLEWLVSLY
NNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKWAPSV
VKVSYKGSPAARRAFLPILRSGKFNVLITTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNH
HCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAM
TGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR
HMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTSGV
VQGLELYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFTYRSFKYLRLDGT
TKAEDRGMLLKNFNDPSFDYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDR
AHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERKAFLQA
ILEHEEQDEFTFALVSQEEDEVPDDETVNQMIARSEEEFDHFMRMDLDRRREDARNPKRK
PRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEE
GTLDEIEEEVRYKKTTRKRKRDRDLDLPGPATPSSSGRSRDKDDDSKKQKKRGRPPAEKL
SPNPPTLTKKMKKIVDAVIKYKDGNGRQLSNVFIQLPSRKELPEYYELIRKPVDFRKIKE
RIRSHKYRTLNDLEKDVMLLCQNAQTFNLEGSQIYEDSIVLQSVFTSVRQKIEKEEESEG
EESEEEEDEADEGSESESRSVKVKIKLSRKEKVERGKGRRRTGRSWRPKPVISDEESEED
QEEEHSASGSEED
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgacccacctatgggcgggacccctcggccgggcccttccccaggccct
gggccatctccaggggccatgttagggcctagtcctggaccctcacctggctctgcccat
ggaatgatgggccccagccctgggcccccctcctcaggacatccactacctccacagggc
ccctcaggttacccccaggacaacatgctccagttgcacaagcccatggaaggcatgcat
gagaaagtcattcctgaagatcaacgctacgctcaaatgaaggctatgggcatgagaccg
ggtgggcacagtggcatggggcctccacccagtcctctggaccaacactctcaaggttac
ccctctcctctgggtggttctgaacatgcccccagtccggtacctgctaacggccctccg
tctggccccatgatgcctgctggttctggtgccatggagggcggtgacccacaggtcatg
ggtcagcagaaccgcagcgttggtgccggtggagttgcagtttcaggacccagcggagga
cctccaaatgcaggtggacctggtggagccggtgggcccactccttttaaccaaaaccag
cttcaccaactgcgggcacaaatcatggcctataagatgctggcacgcgggcaagctcta
cctgaccacctacagatggcggtgcagggaaaacggcccatgccaggcatgcagcagggg
atgcccaacatgccccctgcctcaggacaaggagcaggaccacctggaccaggaggcccc
gtacctgggggacccaactacaatagaccacatggaatggttggaccaaacatgccgctt
ccaggaccttctggtgttcctccaggcctgcagggacaacccaccaatggaccacctaaa
tcttggcctgaagggcccatggtgaatgctgccgcccctgcaagtgcaccacagaagctg
atacctcctcagcccacgggccgcccgtctccagcaccaccttcagttcctcccgctgcc
tcgcccgtcatgccccctcagacccaatctccaggacaaccgacgcagccgcccatggtg
cttcatcagaaacagaaccgcatcacacccatccagaaaccccggggtctggacccagtg
gagatcctccaggagagagagtacaggttacaggctcgtattgctcatcgtattcaggag
ctggagaaccttccaggctctctggctggagacttgaggaccaaagccaatattgagctc
aaggcacttaggctcctgaactttcagagacagctccgccaggaggtcgtagtgtgtatg
aggcgggacacggccctagagacagcgctcaacggcaaggcctacaagcgcagcaagaga
cagtccctgcgtgaggctcgtatcacagagaaactggagaaacagcagaagatcgagcag
gaacgcaagcgccgtcagaaacaccaggagtatctcaacagcatcctgcagcatgcaaag
gacttcaaggaatttcatcgctccatcaccgcaaagatccagaaggtgaccaaagccata
gccacgtaccacgccaacactgagagagagcagaagaaggagaatgagcgtatcgagaag
gagagaatgaggaggctgatggctgaagatgaagagggttacaggaagctgatcgatcag
aagaaggacaaacgtctggcttacttgctgcagcagacggacgagtatgtggccaacctc
accgagctcgtcagagctcacaaagctgtccaggccctcaaagacaagaagaagaagaag
aaaaagaagaagccagagaatgctgagagtggagctcttgctctaggtccagatggagag
cctctggatgagaccagtcaaatgagtgatctaccggtgaaggtgattcacatagacagt
gggaagatcctcactggcatggatgctcctaaagctggacagctggatgcctggctggag
gtgaatccagggtacgaggtggccccgcggtctgatagtgaagatagcggctcagaggag
gaggaagatgaggaggaggagcagtctcagccctctcaatcttcatcagaggagaagaag
ataattccagatccagacagtgaggatgtgtctgaggtggacgtccgtcacatcattgaa
catgccaagcaggatgttgacgatgaatacggtaatgccgcgttcgttaggggcctgcag
tcgtactacgccgtggctcacgcagtcacagagagggtggagagacagtcaagcctgtta
ataaatggacagctcaaacagtaccagatcaaaggtctggagtggctggtgtctctgtat
aacaataacttgaatggcattctggctgatgaaatgggtttgggaaaaaccatccagacc
attgcactcatcacctacctcatggagtacaaacggctcaacggacccttcctcatcatc
gtccccctctcgactctgtcgaactgggtgtatgagtttgataagtgggctccatctgtg
gtgaaagtttcttataagggctctcctgctgctcgccgcgcatttcttcccattttgcgc
agcggcaagttcaacgtgctgatcaccacttacgagtacatcatcaaagacaagcaagtg
ctggccaagctccgttggaagtacatgatagtggatgaaggtcaccgtatgaagaatcac
cactgtaaactgactcaggtgttgaacacacactacctggcacctcggcgtctgctgctc
accggcacgccgctgcagaacaagctgcctgaactgtgggcgctgctcaacttcctgctg
cccaccatcttcaagagctgcagcacctttgagcagtggttcaacgcaccattcgccatg
accggagagaaggtggacctgaacgaagaggagaccattctgatcatccgtcgtctgcac
aaagtgctccgccccttcctgctcaggagactcaagaaggaagtggaggcccaactgcca
gagaaggtggaatatgtgatcaagtgcgacatgtcggctctgcagagagtgctgtataga
cacatgcaggctaaaggagtgctgctcactgatggctctgagaaagacaagaagggtaaa
ggaggcactaagactctaatgaacactattatgcagctgaggaagatttgtaaccaccct
tacatgttccagcacattgaggaatctttctctgagcatttgggcttcacttcaggcgtt
gttcagggacttgaattgtaccgtgcctctggtaagtttgagctgctggaccgtatccta
ccgaagctccgcgccaccaaccacaaagtgctgctcttctgtcagatgaccacgctcatg
accatcatggaagactacttcacctaccgcagcttcaaatacctgcgcttggacggaacc
actaaggctgaggatcgtggcatgttgctgaagaactttaacgatccgtcctttgactac
tttatcttcttgctgagcaccagagcaggaggtctggggctgaacctgcagtctgccgac
actgttatcatctttgacagcgactggaaccctcaccaggatctgcaggcccaggatcgc
gcccatcgtatcgggcagcagaacgaggtgcgtgtgctgcgtctgtgcaccgtgaacagc
gtggaggagaagatcctggccgctgccaaatacaagctgaacgtggaccagaaggtcatc
caggccggtatgttcgaccagaagtcgtccagccacgagcgcaaagctttcctgcaggcc
atcctggagcatgaagagcaagatgagttcacattcgctctcgtatctcaggaggaagat
gaagtgccagatgatgagactgttaatcagatgattgctagaagcgaggaagagttcgat
cacttcatgcgcatggatctcgaccgtcgccgtgaagacgcacgtaacccgaaacgcaaa
ccccggctgatggaggaggatgagctgcccacctggatcatgaaggacgatgcagaggtg
gaaaggctcacctgcgaagaagaagaggagaagatgtttggccggggctcccgtcaaaga
aaagaagtggactacagtgactccctcacagagaaacagtggctgaaggccatcgaggaa
ggcacccttgatgagattgaagaagaggtgcgctacaagaaaacaacccggaaaaggaag
cgggaccgtgacctcgaccttccaggcccggccacgcccagctccagtgggcggagcaga
gataaagatgacgacagtaagaagcaaaagaaacgaggtcgtcctcctgctgaaaaactc
tcgcccaaccctcccacactcaccaagaaaatgaagaagattgtggatgcagtaattaaa
tacaaggatggcaatggaagacaactgagtaatgtgtttattcagttgccatctcgtaaa
gagctaccagaatattacgaactcattcgcaaacctgtggacttcaggaagatcaaggaa
cgcattagaagtcataagtaccgcactctgaatgacctggagaaagatgtcatgcttctc
tgtcagaacgctcagaccttcaacctagagggatcacagatctacgaggactctattgtg
ctgcagtctgtgttcaccagtgtgcggcagaagatcgagaaagaggaagagagcgaggga
gaagagagtgaggaggaagaggacgaggcagatgaaggatcagagtctgaatctcgttca
gtgaaggtgaagataaagctgagtcgaaaggaaaaggtggagagaggaaagggaagacgc
cgaaccggacgcagttggcgccctaaacccgttattagtgacgaggaaagtgaggaggac
caggaagaggagcattctgctagtggcagcgaggaagattaa
DBGET
integrated database retrieval system
