Cyprinus carpio (common carp): 109055355
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Entry
109055355 CDS
T05134
Name
(RefSeq) transportin-2-like
KO
K18727
transportin-2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109055355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109055355
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109055355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
HEAT_2
TPR_IMB1
TOR1L1_N
TPR_IPO5
Vac14_Fab1_bd
HEAT_EF3_N
Cnd1
IBN_N
Arm
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
HEAT_GCN1_C
CEP104-like_TOG
Ltn1_1st
Dopey_N
INTS7_N
UNC45-central
VPS15-like_hel
RTP1_C1
SCD
DUF2573
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
109055355
NCBI-ProteinID:
XP_042585770
Ensembl:
ENSCCRG00000016423
UniProt:
A0A8C1VDV8
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All DBs
Position
A3:complement(30998861..31016176)
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AA seq
889 aa
AA seq
DB search
MEWQPDEQGLQQVLHLLKDSQSPNTATQRAVQEKLEQLNQFPDFNNYLIFVLTRLKTEDE
PTRSLSGLILKNNVKVHYQNFPPAVAHFIKQECLNNIGDPSPLIRATIGILITTISTKGE
LQTWPELLPQLCNMLNSEDYNICEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAVACVNQFIIGRAQALMDNIDTFIECLFALATDEDSEVRKNVCRALVML
LEVRVDRLIPHMRSIVEYMLQRTQDPDENVALEACEFWLTLAEQPICKDVLSGHLAQLVP
VLVNGMKYSEIDIILLKGDVEEDEAVPDNEQDIKPRFHKSRTVTLRHEGDEGEEGEESDE
DDDDDDDSLSDWNLRKCSAAALDVLANVFRDELLPHLLPVLKELLFHPEWVVKESGILVL
GAIAEGCMQDMVLYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQPPDSYLKPL
MTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFSKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKNLAQAMMYTQHPDQYEAPDKDFMIVALDLLSGLAEGLGAHVEQ
LVTRSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFLHVKPCIAELMPVLGLNLNPEF
ISVCNNATWAIGEIAMQMGMEMQPFVALVLNNLVEIINRPNTPKTLLENTAITIGRLGYV
CPQEVAPMLPQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQDFIFFCDAVAS
WVNPKDDLRDMFYKILHGFKDQVGEDNWQQFSEQFPPLLKERLSACYGV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccggatgaacaaggcctccagcaggtcctgcatctactgaaagactcc
cagtctccaaacacggccacacagcgagctgtgcaggagaaacttgagcagctgaaccag
tttcctgatttcaacaactatcttatctttgtcctgacgaggctgaaaactgaagatgag
cccactcgatctctcagtggtctgatactgaagaacaacgtgaaggtgcactatcagaac
ttccctcctgcggttgcacacttcatcaagcaggaatgtttaaacaacatcggagaccct
tcccctctcatccgcgccacgattggtatcctcatcacgacgatttccaccaaaggggag
ctgcagacgtggccagagttgctgcctcagctgtgcaacatgctcaattcagaggactac
aacatctgtgagggctcgtttggagctttacagaagatctgcgaggactcgtctgagctc
ctggacagtgacgctctcaaccgacccctcaacatcatgattcccaagttcctgcagttc
ttcaaacactgcagccccaagatcaggtctcatgctgttgcctgtgtgaaccagtttatc
atcggaagagcgcaagccctgatggacaacattgacacctttattgagtgtctttttgcg
ctggccacagatgaggactcagaggtgcggaagaatgtgtgcagggctctggtcatgctg
ctggaggtgcgagtggaccgactcatccctcacatgcgcagtatcgtagagtacatgctg
cagcgcacacaggacccggatgagaatgtggctctggaggcctgtgagttctggcttacg
ctggctgagcagcccatctgtaaggacgtcctgtctggacatcttgcacaactggttcct
gttctggtgaatgggatgaagtactcggagattgacatcattttgttaaagggtgatgtg
gaggaagacgaggccgtgccggacaatgagcaggacataaagccacgctttcacaagtct
cgtaccgtcacccttcggcacgagggtgatgaaggggaggaaggagaggagagtgatgag
gatgatgacgatgatgacgacagtctgtccgactggaatctacgtaagtgttcagcggct
gctcttgatgtcctggcaaacgtgtttcgggatgagttgctgccacacctgcttccagtg
ctgaaggagctgctgttccacccagaatgggttgttaaagagtctggcatcctggtgctg
ggggccatcgccgaaggctgtatgcaggatatggtcctgtacctgccagagttaattcct
cacctgatccagtgtctcagtgataagaaagcactggtccgctccatcgcctgctggact
ctgagccgctatgcacactgggtggtcagccagccgccagactcctacctcaaacccctc
atgaccgagctgctcaaacgaatcctcgacagcaacaagagggttcaagaggctgcctgc
agtgcatttgcgactctggaagaggaggcctgtacagagctggttccctacttgagcttc
attctggacactctggtgtttgccttcagcaagtaccagcacaagaacttgttgatcctc
tacgacgccatcggaacccttgctgactctgtcggacaccatcttaaccagccagaatac
atccaaaagctcatgccccctcttattcagaaatggaatgagttaaaagatgaagacaag
gatctgttccctttgctggagtgcctgtcttcggtggccacagcactacagagcggcttc
ctgccctactgtgagccagtttaccagcgctgtgtcaccctggtccagaagaacctcgct
caagccatgatgtatacccagcaccctgaccaatacgaggcccctgataaagacttcatg
attgtggctcttgatctgctcagcggtctggcggagggactcggagctcatgtagaacag
ctggtcacccgcagcaacatcatgaccctgctcttccagtgcatgcaggacacaatgcca
gaagtgcgtcagagctcgttcgctctgctgggagacctgacgaaggcatgtttccttcat
gtgaagccctgcatcgctgagctcatgcctgtcctgggactcaacctcaacccggagttc
atatctgtgtgcaacaatgccacatgggccatcggagagatcgccatgcagatgggtatg
gagatgcagccatttgtggccttggttctcaataaccttgtggagatcatcaacagacct
aatacacccaaaactctgctggagaacacagccattacgattggtcggctgggatatgtg
tgtccacaggaagttgcccccatgttgccacagttcattcgcccctggtgcacgtcactt
agaaacattcgggacaatgaagagaaagactcggccttcaggggcatttgtgtaatgatt
ggggtaaatcctggaggggtcgtccaggacttcatctttttctgtgacgctgtggcctct
tgggtaaatccaaaagacgatttgagagacatgttctacaagattttgcacggcttcaag
gatcaggttggtgaggataactggcagcagttctcagaacagtttccaccgctgctgaag
gagaggctttcagcctgctatggtgtgtag
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