KEGG   Cyprinus carpio (common carp): 109055355
Entry
109055355         CDS       T05134                                 
Name
(RefSeq) transportin-2-like
  KO
K18727  transportin-2
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109055355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109055355
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     109055355
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_GCN1 HEAT_2 TPR_IMB1 TOR1L1_N TPR_IPO5 Vac14_Fab1_bd HEAT_EF3_N Cnd1 IBN_N Arm HEAT_MROH2B_C TPR_DNAAF5 PDS5 Adaptin_N MMS19_C HEAT_GCN1_C CEP104-like_TOG Ltn1_1st Dopey_N INTS7_N UNC45-central VPS15-like_hel RTP1_C1 SCD DUF2573 DNA_pol_phi
Other DBs
NCBI-GeneID: 109055355
NCBI-ProteinID: XP_042585770
Ensembl: ENSCCRG00000016423
UniProt: A0A8C1VDV8
LinkDB
Position
A3:complement(30998861..31016176)
AA seq 889 aa
MEWQPDEQGLQQVLHLLKDSQSPNTATQRAVQEKLEQLNQFPDFNNYLIFVLTRLKTEDE
PTRSLSGLILKNNVKVHYQNFPPAVAHFIKQECLNNIGDPSPLIRATIGILITTISTKGE
LQTWPELLPQLCNMLNSEDYNICEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAVACVNQFIIGRAQALMDNIDTFIECLFALATDEDSEVRKNVCRALVML
LEVRVDRLIPHMRSIVEYMLQRTQDPDENVALEACEFWLTLAEQPICKDVLSGHLAQLVP
VLVNGMKYSEIDIILLKGDVEEDEAVPDNEQDIKPRFHKSRTVTLRHEGDEGEEGEESDE
DDDDDDDSLSDWNLRKCSAAALDVLANVFRDELLPHLLPVLKELLFHPEWVVKESGILVL
GAIAEGCMQDMVLYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQPPDSYLKPL
MTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFSKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKNLAQAMMYTQHPDQYEAPDKDFMIVALDLLSGLAEGLGAHVEQ
LVTRSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFLHVKPCIAELMPVLGLNLNPEF
ISVCNNATWAIGEIAMQMGMEMQPFVALVLNNLVEIINRPNTPKTLLENTAITIGRLGYV
CPQEVAPMLPQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQDFIFFCDAVAS
WVNPKDDLRDMFYKILHGFKDQVGEDNWQQFSEQFPPLLKERLSACYGV
NT seq 2670 nt   +upstreamnt  +downstreamnt
atggagtggcagccggatgaacaaggcctccagcaggtcctgcatctactgaaagactcc
cagtctccaaacacggccacacagcgagctgtgcaggagaaacttgagcagctgaaccag
tttcctgatttcaacaactatcttatctttgtcctgacgaggctgaaaactgaagatgag
cccactcgatctctcagtggtctgatactgaagaacaacgtgaaggtgcactatcagaac
ttccctcctgcggttgcacacttcatcaagcaggaatgtttaaacaacatcggagaccct
tcccctctcatccgcgccacgattggtatcctcatcacgacgatttccaccaaaggggag
ctgcagacgtggccagagttgctgcctcagctgtgcaacatgctcaattcagaggactac
aacatctgtgagggctcgtttggagctttacagaagatctgcgaggactcgtctgagctc
ctggacagtgacgctctcaaccgacccctcaacatcatgattcccaagttcctgcagttc
ttcaaacactgcagccccaagatcaggtctcatgctgttgcctgtgtgaaccagtttatc
atcggaagagcgcaagccctgatggacaacattgacacctttattgagtgtctttttgcg
ctggccacagatgaggactcagaggtgcggaagaatgtgtgcagggctctggtcatgctg
ctggaggtgcgagtggaccgactcatccctcacatgcgcagtatcgtagagtacatgctg
cagcgcacacaggacccggatgagaatgtggctctggaggcctgtgagttctggcttacg
ctggctgagcagcccatctgtaaggacgtcctgtctggacatcttgcacaactggttcct
gttctggtgaatgggatgaagtactcggagattgacatcattttgttaaagggtgatgtg
gaggaagacgaggccgtgccggacaatgagcaggacataaagccacgctttcacaagtct
cgtaccgtcacccttcggcacgagggtgatgaaggggaggaaggagaggagagtgatgag
gatgatgacgatgatgacgacagtctgtccgactggaatctacgtaagtgttcagcggct
gctcttgatgtcctggcaaacgtgtttcgggatgagttgctgccacacctgcttccagtg
ctgaaggagctgctgttccacccagaatgggttgttaaagagtctggcatcctggtgctg
ggggccatcgccgaaggctgtatgcaggatatggtcctgtacctgccagagttaattcct
cacctgatccagtgtctcagtgataagaaagcactggtccgctccatcgcctgctggact
ctgagccgctatgcacactgggtggtcagccagccgccagactcctacctcaaacccctc
atgaccgagctgctcaaacgaatcctcgacagcaacaagagggttcaagaggctgcctgc
agtgcatttgcgactctggaagaggaggcctgtacagagctggttccctacttgagcttc
attctggacactctggtgtttgccttcagcaagtaccagcacaagaacttgttgatcctc
tacgacgccatcggaacccttgctgactctgtcggacaccatcttaaccagccagaatac
atccaaaagctcatgccccctcttattcagaaatggaatgagttaaaagatgaagacaag
gatctgttccctttgctggagtgcctgtcttcggtggccacagcactacagagcggcttc
ctgccctactgtgagccagtttaccagcgctgtgtcaccctggtccagaagaacctcgct
caagccatgatgtatacccagcaccctgaccaatacgaggcccctgataaagacttcatg
attgtggctcttgatctgctcagcggtctggcggagggactcggagctcatgtagaacag
ctggtcacccgcagcaacatcatgaccctgctcttccagtgcatgcaggacacaatgcca
gaagtgcgtcagagctcgttcgctctgctgggagacctgacgaaggcatgtttccttcat
gtgaagccctgcatcgctgagctcatgcctgtcctgggactcaacctcaacccggagttc
atatctgtgtgcaacaatgccacatgggccatcggagagatcgccatgcagatgggtatg
gagatgcagccatttgtggccttggttctcaataaccttgtggagatcatcaacagacct
aatacacccaaaactctgctggagaacacagccattacgattggtcggctgggatatgtg
tgtccacaggaagttgcccccatgttgccacagttcattcgcccctggtgcacgtcactt
agaaacattcgggacaatgaagagaaagactcggccttcaggggcatttgtgtaatgatt
ggggtaaatcctggaggggtcgtccaggacttcatctttttctgtgacgctgtggcctct
tgggtaaatccaaaagacgatttgagagacatgttctacaagattttgcacggcttcaag
gatcaggttggtgaggataactggcagcagttctcagaacagtttccaccgctgctgaag
gagaggctttcagcctgctatggtgtgtag

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