Cyprinus carpio (common carp): 109055402
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Entry
109055402 CDS
T05134
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109055402 (sox21a)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109055402 (sox21a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109055402
NCBI-ProteinID:
XP_042581369
UniProt:
A0A9Q9WDG2
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Position
B6:6025293..6026142
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AA seq
226 aa
AA seq
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MAKPMDHVKRPMNAFMVWSRVQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNLIKKDRYHFNVTYNLGDSDPLKADSSAEKTSATRA
FFSHHLSTNPYPFLDLTSKMSELPPAPFPHYSMLGYPGGVSAFHGIPGLLAGAPHAHPSA
GNPGHMVPYNCLGWPGSGPVVPSSYVLFPGMTKAQHEPYLTYAATI
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctatggaccatgttaaacgtcccatgaacgcttttatggtgtggtcgaga
gtccagagacggaagatggcactggacaacccgaagatgcacaactctgagatcagcaaa
cgcctcggaggagaatggaaactcctgtcagactctgaaaaaagaccttttattgacgag
gccaaacgcctcagagccgttcacatgaaagaacacccggattacaaatacagaccgcgg
cgaaagcccaaaaacttgatcaaaaaagacaggtatcattttaatgtgacgtacaatctg
ggtgacagtgacccgttgaaagcggactcgagcgcggagaagacgtctgctactcgagcg
ttttttagtcaccacctgtccaccaatccctatccgtttctcgacctgacctccaaaatg
tcggaattaccccctgcacctttcccacattactcaatgctcgggtatcccgggggagtc
tccgcgtttcacgggattcccgggcttctggccggtgcgccgcacgctcacccgtctgcg
ggtaacccgggccacatggtgccctataactgcctgggctggccgggatctggacctgtt
gttccttcatcgtacgtgcttttcccaggaatgaccaaagctcagcatgaaccttatctg
acttacgccgcgacgatatga
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