KEGG   Cyprinus carpio (common carp): 109055465
Entry
109055465         CDS       T05134                                 
Symbol
pafah1b1b
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar00565  Ether lipid metabolism
ccar01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    109055465 (pafah1b1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccar03036]
    109055465 (pafah1b1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109055465 (pafah1b1b)
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109055465 (pafah1b1b)
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109055465 (pafah1b1b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_EML Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_DCAF4 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_RIG_2nd LisH Beta-prop_SPT8 Beta-prop_IFT140_1st LisH_PAC1 Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Nucleoporin_N Beta-prop_NUP159_NUP214 Ge1_WD40 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH LisH_2 DUF2570 SutA-RBD
Other DBs
NCBI-GeneID: 109055465
NCBI-ProteinID: XP_042603876
UniProt: A0A8C1R1W4
LinkDB
Position
B21:16889828..16910223
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEEMDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQNGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSE
NKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTSPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagaggcaacgagacgaactaaatcgagcaatagcagattatttgcgc
tctaatggctatgaagaagcatattctgtttttaagaaggaggcagagttggatatgaat
gaagagatggacaagaagtatgcaggccttttggaaaagaaatggacttcagtcatcaga
ttacaaaaaaaggtaatggagttggagtccaaactaaatgaagctaaggaagagatcact
ttaggaggccccgtgggacagaaacgagatcccaaagagtggatcccacgcccgcctgag
aagtacgccctcagcggccacagaagccctgtcacacgtgtcatcttccaccctgtgttc
agcctcatggtctccgcctcagaggacgccactataaaggtttgggactacgaggctggg
gatttcgagcgtaccctgaagggtcacactgactccgtgcaggacatctcctttgatcag
aatggaaagctgctggcttcttgctccgcagacatgaccatcaaactctgggacttccag
ggctttgagtgcatcaggaccatgcacggacatgatcacaatgtgtcgtcagttgccatc
atgcccaacggtgatcacatagtgtctgcttccagggataagaccattaaaatgtgggag
gtggccactggctactgtgtgaagacgttcacgggtcacagggagtgggtgcgtatggtc
cggcccaatcaagacggcacactattggccagctgctctaatgaccagacggtgcgcgtg
tgggtggtggccaccaaggagtgcaaggcggagctgcgggagcacgagcatgtggtggag
tgcatttcctgggcccctgagagtgcacaccccaccatatctgaggctacaggatctgag
aacaagaagagtggaaagcctgggccattcctgctatccggatccagagacaagaccatt
aaaatgtgggacataagtactggcatgtgccttatgacactggtcggtcatgataactgg
gtgcgtggagtgctgttccatcctggtgggagatttgtagtgagctgtgctgatgacaag
accctgcgtatctgggactataagaacaagcgctgtatgaagaccctgagtgcccatgaa
cactttgttacctctctggatttccacaagacttctccttacgtggtgacaggaagtgta
gatcaaacagtcaaagtgtgggaatgtcgttga

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