Cyprinus carpio (common carp): 109055630
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Entry
109055630 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109055630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109055630
03036 Chromosome and associated proteins [BR:
ccar03036
]
109055630
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109055630
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109055630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
DUF3509
DTP-pb9_A-dom_C
Motif
Other DBs
NCBI-GeneID:
109055630
NCBI-ProteinID:
XP_042573270
Ensembl:
ENSCCRG00000029480
UniProt:
A0A9Q9VY03
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All DBs
Position
B1:37000996..37015052
Genome browser
AA seq
1139 aa
AA seq
DB search
MFSPRGTPSSGRRQAPRTGARKSGLLFSPRRSAVTARYNRVNSSAVVDSYHFDVQIFGSS
LPVRVMEALTMADVDDQISVKVEASGWAWMVCGERLIIWKVSQTSVAKLSVCKDLQLPSS
EFVYSADLISITSSSPLDSAPTQAISALAVSPDGSARFWPSLAHDGTYTETSLDLGGHVC
NYVAAVKGGSFIVSSYRGHLLRLAPDSSGKLHQRPVQQGQGMLSGIGRRVSSLFGIRGQP
ADLTVFSVLWVKETGCLYSLGSCGLSKWEVDENGETQVLSWSTNQIITDSITDAIWDSES
NYSEIKKGVKVSYLDMQYSKAGLVVLAAAWHPGDTPCVAYFCLVTLAESTAPSPDLLTVE
VTKYNPPFQSEEELQKTRLVLPDPSSPAAYLYNEELVFTCSTGAGRGGLAEEKISFSSPG
DRIRGGGVCAGLPVFFSQNSGLVAVLARESASLLPETMEDSLCTSVAGPEGTPFETPPKT
HMVAQEDRTKLLKQAFLQFCRHDPVGAQSMVDELFPSDGEGAAELDAVVTQIDLDLVDDF
PACDPRWAESVPDEGAGFTLTSLILLHQLEDKMKAHRCLMDFLLQTGLLDRLTSTAVHMS
PMATRLLLCEHAEKLSAAIVLKNHHAKHPELVNTAILSALKKSNTDIPSNLTPADVFFRE
VSQISSIFECLLDEEEKALKEHSDAARWAEVVLNVNDIVKDMLQAAAQYRETKASLYRAP
ENCSPEPEYIPWTAFSFMXGHSYFLLIVASLLXTRAVIMRQHELILHAAYPHADVEVRAV
LSEQLVALLDSLLSGYVAQLTSLRRAGHQERYVTLENEYTQKRSELLAPLLELGQHQWVA
ALAEKYCDFDILVQLCERTDNQSRLQQYMVKFADQNFADFLFRWYMEKGKRGKLLSQPIA
THQQLASFLQAHDHLSWLHDIHVQDYQRAHRTLYSQANTETRYFSKKKTLLALSKLTALV
SDMPEAVHRRQLNDIVEQERFLLHQETLPKQLLDEKQLDPDSMPLLSPRNLIELYICNEN
RGANEYDFKKALDLLEYLEEEDAVDTDALKREIFSKALKKDWKESWASSDDNDDPLEAAR
DSTFVRILQKLIQEGVSLQSYLPDVKDLLQEDELESLKSKPYFEFLLRANYEHYLEAHI
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtccccgcggcacgccgagctcaggccgcagacaggcgcccaggaccggcgct
cggaagagcgggctgctgttctctccacgccgctccgctgtcacagccaggtacaacaga
gtaaactcatctgcagtcgtcgattcgtatcattttgacgttcagattttcggatcatct
ctgcccgtcagagtcatggaggcgctgaccatggccgacgtggatgatcagatctctgtg
aaggtggaggcgtccggctgggcctggatggtttgtggagaacggctgatcatctggaaa
gtgtctcagacgtctgtggcaaagctgtcggtgtgtaaagacctccagctgccctccagt
gagtttgtgtacagcgccgatctcatctccatcacttcctccagtccactggattctgcc
cccactcaggctatcagtgcactggctgtgtctccagacggttcggctcggttttggccc
agtctggctcacgacgggacttacactgagacgtctctggatctgggcggacatgtgtgc
aactacgtcgcagcagtaaagggcgggagcttcatcgtgtcatcgtaccgcggtcacctg
ctccggctcgctccggactcctctggtaaactgcaccagagaccggttcagcagggtcag
gggatgctgtccggcatcggacgcagggtttccagcctgttcggcatccgcggccagccg
gccgacctcacagtgttcagtgtgctctgggtgaaggagaccggctgtctgtactctctc
ggctcgtgtggcctcagtaaatgggaggtggatgagaacggtgagacgcaggtgttgagc
tggagcaccaatcagatcatcacagacagcatcaccgacgccatctgggactcagaaagt
aactactccgagatcaagaaaggagtgaaagtctcttatctggacatgcagtacagcaaa
gcggggctggtggtgttggcagcggcgtggcatccgggcgacactccatgtgtggcgtat
ttctgcctggtcactcttgcagaaagcactgcgccgtccccagacctgctcactgtggag
gtcaccaaatacaacccgcccttccagagtgaggaggagctgcagaagacacgtttggtg
ttgcctgatccgtcgagtccagcggcgtacctctataatgaggagctggtgttcacctgc
agcactggagctggacgcggaggactcgccgaggagaagatctccttcagctctccaggg
gaccgtatccgaggcggtggggtgtgtgccggtctgccggtgtttttctctcagaacagc
gggctggttgctgttttagcgagagaaagtgcttccctgctgcctgagaccatggaggac
tcgctctgcacctcagtggctggacctgagggtaccccgttcgagacaccacctaaaaca
cacatggtggctcaggaggacagaacgaagctgctgaagcaagcgttcctgcagttctgc
cgtcatgatccggtaggagctcagagcatggtggatgagctcttccccagcgacggagag
ggagctgcagagctggatgccgtcgtgacccagattgacctggatctggtggacgacttc
cctgcatgtgacccacgctgggccgagtctgttcctgacgagggcgctggatttacactg
acgtcactgatcctgctgcatcagttggaggataagatgaaagctcaccgctgcctcatg
gacttcctgcttcagacgggtcttctagaccgcctcacttccacagcggtgcacatgtcc
cccatggccacgcgactcttgctatgcgagcatgcggagaagctctcggccgccatcgtg
ctgaagaaccatcatgccaagcatccagagctggtgaacacggccatcctgtcagccctg
aagaagagcaacaccgacataccgtccaacctcacgcccgcggacgtgttcttcagagag
gtgtctcagatctcctccatctttgagtgtctgttggatgaggaggaaaaagctttaaaa
gagcattcggatgccgccaggtgggccgaggtggtgctcaatgtcaatgacattgtcaag
gatatgctccaagcagcagcacagtaccgagagaccaaagcatctctgtacagagcgcca
gagaactgcagcccggagccagagtacatcccatggacagcttttagttttatgtagggt
catagttacttcctcttaatcgttgcatccctactgtaaacacgagccgtcatcatgcgg
cagcacgagctgatcctgcacgcggcgtatcctcacgcagacgtggaggtgcgcgccgtg
ctgagcgagcagctggtggcgctgttggactctctgttgagcggttacgtggctcagctg
acgtctctccgccgtgccggacatcaggagcgctacgtcacgctggagaacgagtacacg
cagaaacgctcggagctgctcgcacctctcttggagttgggtcagcatcagtgggttgcg
gcgctggcggagaaatactgtgactttgacatattggtgcagttgtgtgagaggacggat
aaccagagtcgactacagcagtacatggtcaaattcgctgatcagaacttcgctgacttc
ctgttccgctggtacatggagaaaggcaagagagggaagctgctgtctcagccaatagca
acacaccagcagctggccagcttcctgcaggctcatgatcacctcagctggctgcatgac
atacatgtgcaggactatcagcgagcccatcgtaccctgtacagtcaggccaacacagag
actcggtacttcagcaagaagaagaccctgctggccctcagcaaactcacggctctggtg
tcagacatgcctgaagctgtgcaccgcagacagctcaacgatatagtggagcaggagagg
tttctgcttcatcaggagactcttcctaaacagctgctggacgagaagcagctggaccca
gacagcatgcctttactgagccctcggaacctcatcgaactgtacatctgcaatgagaac
cgtggagccaacgagtacgacttcaagaaagctctcgatctgctggagtacttggaggag
gaggacgcggttgatactgatgccctaaaacgggagatcttcagtaaagccttgaagaaa
gactggaaggagagttgggcgtcgtctgatgataatgacgatcctctagaagcagccaga
gacagcactttcgtcaggatcctacagaaactcattcaggaaggtgtttctctgcagtcg
tacctgcctgacgtgaaggatcttctgcaggaagacgagctggagagtctcaaatcgaaa
ccgtactttgagttcctcctgcgagccaactatgagcactacctggaagctcatatatga
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