Cyprinus carpio (common carp): 109055647
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Entry
109055647 CDS
T05134
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109055647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109055647
03036 Chromosome and associated proteins [BR:
ccar03036
]
109055647
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109055647
Coactivators
SAGA/TFTC/STAGA complex
109055647
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109055647
STAGA complex
109055647
TFTC complex
109055647
SAGA complex
109055647
SLIK complex
109055647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Vps41
RMC1_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
PROPPIN
PEP5_VPS11_N
Ge1_WD40
Beta-prop_WDR75_2nd
WD40_like
Nbas_N
TRIP13_N
Mala_s_1-like
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
109055647
NCBI-ProteinID:
XP_042573268
UniProt:
A0A9Q9VY04
LinkDB
All DBs
Position
B1:complement(36993717..37000756)
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AA seq
603 aa
AA seq
DB search
MKRVRTEQIQYAVTQYLKRRQYIDTDGSLKGAKLSQSAEEMAASLTVQTESSCANVVSAA
PCQSDPQQYETQFSRLRSFLQDAEAPLVKEVSGVLFPLFLYLHLDMARCGLKGAVDSFYS
RFHSFFQQDPEQKAVVDLLRGVVTPQDVTSNPKLCSLLDHKYVVHLTDQAYSYLLRYLQS
DDNSAICWALGAHVQMEVTAACRTDYQLYGTGIGAGNTTCTSSSSAAWAAVDGVEGAERV
EVTAGLPQNEAALEALQDCIKRVREGAPSLTTVCFYAFQHTDQLLNTAEVSPDSRLLAAG
FDNSAVKLWSLRARKLKAGPHWTDVSKIRLACDMLEEEADDEDASGSEIKTLRAHSGPVY
RTAFLTDGSGLLSCSEDSTVRLWDLSSFTNTVLYRGHAYPVWDMDVSPCSLYFSTASHDR
TARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTS
HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGSLFKDLRGHSDSITSLSFSQDSSLVA
SASMDNSVRVWDIRSAHGSAPSDGSSSELIGQYTGSTSNILNVQFMACNLLLVTGTALEK
QEQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtgcggacggagcagatccagtacgcggtgacccagtacctgaagaggaga
cagtacatagacacagatgggtctctgaagggggccaaactctcccagtccgctgaggag
atggcagccagtctgacagttcagacagagtccagctgtgcgaatgtggtgtctgcagcc
ccgtgtcagtctgacccgcagcagtacgagacccagttctccagactgcgctccttcctg
caggatgcagaagcaccgttagtgaaggaggtgagcggcgtcttgtttccgctcttcctc
tacctgcacctggacatggcgcggtgtggcctgaagggggcggtagactcgttctacagt
cgcttccactcgttcttccagcaggaccccgagcagaaagcagtcgtagacctgctacga
ggagtcgtcacgcctcaggatgtgacctcaaaccctaaactctgctcgctcctggatcac
aagtatgtggtgcacctgacggatcaagcgtacagctacctgctgcgttacctgcagagc
gacgacaacagcgccatctgctgggcgctcggcgcacatgtgcagatggaggtgacagca
gcgtgcagaactgactaccagctgtacggcacagggattggagcgggaaacacgacctgc
acttcctcttcctccgctgcatgggctgcggtggacggggtggagggggcggagcgtgtg
gaggtcacggccgggttacctcagaacgaggcggcgctggaggcgctgcaggactgcata
aagcgcgtgcgggaaggtgcgccttcgctcaccaccgtctgcttctacgccttccagcac
acggatcagctgctgaacacggccgaggtgtcgccagacagccgtctgctggcagccggc
ttcgataactctgccgtcaagctgtggagcctgcgggccaggaagctgaaggcgggacct
cactggaccgatgtgtctaaaataagactggcctgtgacatgctggaggaggaggcagat
gacgaggacgcctcgggcagtgagataaagaccctgcgcgctcacagcggccccgtgtac
cgcacggcgttcctgacagatggctctggcctgctgtcctgttcggaggactccaccgtg
cgcctctgggacctgagcagcttcacgaacaccgtcctgtaccgcggccacgcctacccc
gtctgggacatggatgtcagtccctgcagcctgtacttctccacggcgtcccacgaccgc
accgcacgcctctggagcttcgcgcgcacctatccactgcgtctgtacgccggacacctc
tccgacgtcgactgtgtcaaattccaccccaactccaactacgtggccaccggctccacg
gataaaaccgtgcgcctgtggagcacccagcagggggcgtctgtgaggctgttcaccagt
caccgcgggcccgtgctgtcgctcgccttctcgcccaacggcaagtacctggcctcggcc
ggagaggaccagagactgaagctgtgggacctggcgtccggcagcctgttcaaagacctg
cggggtcacagcgacagcatcaccagcctctccttcagccaggacagcagtctggtggcc
tccgcctccatggacaactcggtgcgggtgtgggacatacgcagcgcccacggcagcgcc
cccagcgacggctccagcagcgagctgatcggacagtacacaggcagcactagcaacatc
ctcaatgtgcagttcatggcctgcaacctgctgctggtgacgggcacggcgctggagaaa
caggaacagtga
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integrated database retrieval system
