Cyprinus carpio (common carp): 109055665
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Entry
109055665 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109055665
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109055665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
DUF7652
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
109055665
NCBI-ProteinID:
XP_042571577
Ensembl:
ENSCCRG00000029608
UniProt:
A0A9Q9VUS6
LinkDB
All DBs
Position
A25:13890269..13922070
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AA seq
1777 aa
AA seq
DB search
MLLQLAALLTLGAWALADVPELGDVCREGSCYPATGDLLIGRAQQLLATSTCGLQKPEPF
CIVSHLQEEKKCFVCDSRETYDESMHHITSHRIENVVTTFAPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAYDCETSFPFVSQGPMT
KVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYSIYDMVVRGNCFCYGHASECAPIDGAGEVVDGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYQASGNVSGGVCD
DCKHNTMGHKCEHCKPFFYQHPEKDIRDPSICEPCNCDPVGSLSGGVCDSLTDVSLGLIA
GQCRCKPNVEGERCDQCKQGHYGLNDDPLGCQTCTCNALGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHCGAVNNNCSPETGQCECREHMFGRRCDQVE
SGFYFIALDHYAYEAEDAKFGAVSVLIIPIVKVLEYLNDISGAYLEFSIDNIPYSMEYDI
IIRYEPQLPEQWEEVLMTVIRPRVITADSRCANIMPDDDNQVVSLHPGSRYVVLSRPVCF
EEGLNYTVRLSLSRYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGDLVTSSAWE
TFQRYRCLENSQAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLSTVCDPSGGQC
QCRPNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSVHSFCHEASGQCECIPGVYGRQCD
RCLPGHWGFPNCRPCTCNGHAEQCDPHTGQCLSCRDHTSGQNCEKCFNGYYGDPVLGSGD
HCRPCMCPDGPGSGRQYSGTCYKSFDSNQVFCVCNQGYKGARCEECAPGYYGNPHEVGGE
CRPCQCNNNIDMTDPESCDARTGACLKCLYHTEGEGCNRCKLGYYGNALTQSCRKCVCNH
MGTVKETCPSPGNCNCDLNSGQCQCLPNVVGLHCDQCAPDTWNMGSGKGCEACDCDLSHS
FSSSCNEVMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQCNKATGHC
VCVEGVSGPRCDTCARGYTGEFPHCERCHQCFAEWDVIVHDLTNQTHRLVQKVNTIKATG
ITGPYQATINNVENSANSIRNILAQNPATQPLTEIQGLLEQARXVIKNQTQTLTXQTIPY
TTSHNKTTNTKTKLKSLKEEAQKLEQMVKDLQEQVEFVKNSDIRGARASMTRYYEQSQMA
EIRANASTIDPGNLVNQSATLRTETEDLMPDQRRSFIQRQDEFSKKLDNLAGQLETLDLS
ELSEKTCGSPAGSENCADSPCGGLSCVDGEGNRKCGGEGCDGLTTLAHNAWQRAKDFDLE
IISAREEVDKLSKMVSEAKVKADEAKLNAQVVLAKTNETKKRVDGSNEELRQLIKQIRDF
LTQDGADLESIEAVANEVLQMQMPTTPAQLQNLTAEIRERVGSLTDVEDILNQSAADILR
AESLLEQARKARKEATDMKDTVEMVKEALQQAERAQSSVTEALKQATTDIKGTQDLLVSV
ESETSNSELKVSNATRRLLKLESDVALLKEKALNTSTSANSTEKEADNINALADQLKKDL
DSELKDKYSTVEELITQKAEGVAEAKKRAEKLQQEAKNLLLQASDKLQLLKNLEKGYDEN
QKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgctcctacagcttgcagcccttttaactttaggggcatgggctctggcagatgtgcct
gagctgggagatgtttgcagagagggaagctgttatcctgccacaggagatcttctcatt
ggaagagcgcaacaactcttggccacctccacatgcggactccagaaacctgagcccttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgtgattccagggagacc
tacgatgagagcatgcaccacataaccagtcacagaattgaaaatgttgtgactacattt
gccccgaaccgcctcaagacttggtggcaatcagaaaatggcctggagaacgtcacaatc
cagttgaacctggaggctgagttccacttcacccacctcatcatgacctttaaaacgttc
agacctgctgctatggtgatcgaacgttctgcagacttcgggaagacttggcaagtgtat
cgttacttcgcctatgactgcgagacctccttccccttcgtctctcaaggacccatgacc
aaagtggatgatgttatctgtgattctcgctactctgacattgaaccctcaacagaaggc
gaggtcatctttagggttttggatccagccttcaggattgatgatccttacagccccaga
atccaaaacatgttaaagatcactaatctgagggtgaagttcactaagctgcacactctc
ggggacaatcttctggactcacgtatagagatcaaggagaagtactactactcaatctac
gacatggtggtcagaggaaactgtttttgctatggtcacgcatctgaatgcgcccccatc
gatggagctggagaggttgtggacggcatggtccatggccattgtatgtgtaatcataac
accatgggtctgaactgtgagcgctgtcaggacttctaccatgacctgccctggaggccc
gcagagggacgcaacaccaacgcctgtaaaaagtgtaactgcaatcatcactctgattcc
tgtcatttcgacatggccgtgtatcaggcgtcaggtaatgtgagcggcggtgtgtgcgac
gactgcaagcacaacaccatgggtcacaagtgcgaacattgcaagccgttcttctaccaa
catccggagaaagacatccgcgaccccagcatctgcgaaccctgtaactgtgatccggtc
ggctctctcagcggtggagtgtgtgattctctcacagatgtgtctcttgggctgatcgcg
ggtcagtgtcgctgtaagcctaatgtggagggtgaacgctgtgaccagtgcaaacagggc
cattacggactcaatgacgaccctctgggatgccagacatgcacatgcaatgctttgggg
acggttccaggtggaagcccgtgtgatacagactcaggaaactgctactgtaaacgtctg
gttaccggaaggaattgtgaccagtgtctgcctcagcactggggtctcagtaatgacatg
gatggctgcagaccatgtgactgtgatcattgtggcgcagtcaacaacaattgctctcct
gaaacgggtcagtgtgagtgtcgtgagcacatgtttggcaggcgctgcgaccaagtagaa
tctggtttttacttcattgctctggaccactacgcttatgaagcagaggacgccaagttt
ggagctgtaagtgtcctcattattcccattgtcaaagtccttgagtatctgaatgatata
tctggtgcctatcttgagttcagcatcgacaacatcccctactctatggagtatgacatt
atcatccgatatgaacctcagctgccagagcagtgggaggaagtgctgatgactgtcatc
aggcctcgcgtcatcactgccgacagccgctgtgcaaacataatgcccgacgatgacaac
caggtggtgtctctgcatcccggatccaggtatgtggtgctgtctaggcctgtgtgtttt
gaagagggcttgaactacaccgtgcgcttgagtctgtctcgctactcggctctcagcgat
gtgcagtcgccgtacacgctcatcgactcgatcgtcctcatgccacactgcaaaaacctg
gatattttctctggctctggctcagagggtggggacttggtgaccagcagcgcctgggaa
accttccagcgctaccgctgtttggagaacagccaagcagtggtgaaaacccccatgact
gatatctgcaggaattacatcttcagtgtgtcggctcttctgcaccagggagttaaagcc
tgtcagtgtgacccgcaggggtctctcagcacggtttgtgacccaagcggtggccagtgc
cagtgtcgtcccaatgtggttggcaggaactgcgacaaatgcgccccagcaaccttcctt
tttggtccacaaggctgcaggccatgtgattgcagtcctgaggggtctgtccactctttc
tgccacgaggccagcggtcagtgtgagtgtattcctggagtgtatgggcggcagtgcgac
cgctgtctgcctggacactggggtttccctaactgtcgcccctgcacttgcaatggccat
gctgagcagtgcgacccacatacgggacagtgtctgtcctgcagggaccacaccagtgga
caaaactgcgagaagtgtttcaatggctactatggtgaccctgtcctgggctctggagac
cactgccgcccctgcatgtgtccggacggtcccggcagcggcagacagtactccggcacg
tgttataagagctttgactctaaccaggtgttctgcgtctgcaaccagggatataaaggt
gccaggtgtgaagaatgcgctcctggttattacggaaacccacacgaggtgggcggagaa
tgccggccctgtcagtgcaacaacaacatcgacatgacagacccggagtcctgtgacgcc
cgaacgggcgcttgtctcaaatgcctgtaccacaccgagggcgagggctgcaaccgctgc
aagctcggttattacggcaatgcactgacacagagctgcaggaagtgtgtgtgtaatcat
atgggcactgttaaggagacatgtccctctccgggtaactgtaactgtgacttaaacagt
ggccagtgtcagtgtcttcccaatgtggtgggcctgcactgtgatcagtgcgcaccggac
acgtggaatatgggcagcgggaaaggctgtgaggcctgtgactgcgacctcagccattca
ttcagctcatcctgcaatgaggttatgggccagtgctcttgtaaacctgggtttggcggc
agaacctgccgagagtgtagagagctgttctggggaaaccctgaggtcaaatgccatgca
tgtgattgtgacccaagaggcatcgcagagcagcagtgcaacaaggccacaggtcactgt
gtttgtgtggagggcgtttccgggccccgatgtgacacgtgcgctcgaggctacacaggc
gagttcccacattgcgagcgctgccaccagtgctttgccgaatgggatgtaattgtgcat
gacctcaccaaccagacccacagactggtccagaaggtcaataccatcaaagccactggc
ataacaggaccgtaccaggccaccatcaataacgtcgaaaacagcgccaactcaatccgc
aacatcttggctcagaatccagccactcagcctctgacagagatccagggacttctcgaa
caagctaggtaagttattaaaaaccaaacacaaaccctaacctaacagaccataccctat
accacatcccacaacaaaacaacaaacacaaaaaccaaactgaaatccctcaaagaagaa
gctcagaagctggaacagatggtgaaagaccttcaggaacaggtggagtttgtgaagaat
tcagacattcgaggggccagagccagcatgactcgatactatgagcagtcccagatggca
gagatccgtgcgaatgcctccaccattgacccaggcaacctggtcaatcaatctgccacc
ctgcggacagaaacggaggacttgatgccagaccaaagaaggagtttcattcaaaggcag
gatgagttttcgaagaaactggacaacctcgctggacagctggagactctggacctttct
gagcttagcgagaagacatgtggcagtccagctggctcagagaactgtgctgactccccc
tgcggaggcctgagctgtgtggatggggaaggaaacaggaagtgtggaggagagggatgt
gatggcctcactacgctggcccacaatgcctggcagagagccaaggacttcgacctggag
attatcagcgctagggaggaagtggacaagctctccaaaatggtgtcagaggcaaaggta
aaagcagatgaagcaaagcttaatgctcaagtagtgctggcaaagactaatgagaccaaa
aaacgagtggacggcagcaacgaggagctacgccagctcatcaaacagatccgagacttc
ctcactcaagatggagcggacctggaaagcatcgaggctgtggccaatgaagttctgcag
atgcagatgcccaccacaccagcccagctgcagaacctgaccgcagagatcagggagcgc
gtgggcagcttgacggacgtcgaggacatcctcaaccagagcgccgctgacatactgaga
gcagaaagcctgctggaacaagcccgcaaggccaggaaggaggcgaccgatatgaaagac
acagttgagatggtgaaggaggccttgcagcaagctgagcgcgcccagagttcagtaacc
gaggcactgaaacaggccactactgacatcaagggaacgcaagacttgctggtctcggtg
gagtcagagacgtccaactcagaacttaaagtgagtaacgccacccgcaggctcctgaag
ttggaaagcgatgtagctctgctgaaagaaaaggctctcaacacctccaccagtgccaac
agcacagagaaagaggctgataacatcaatgcactggctgaccagctcaaaaaggatttg
gattcagagctgaaagacaagtacagcactgttgaggagctgatcacacagaaggctgaa
ggagtggcagaggccaagaaaagagcagagaaactccaacaggaagccaaaaatctactg
ctacaagccagcgacaaacttcagcttctgaaaaatcttgagaagggctatgatgaaaat
cagaagctgctggaggacaaggcaaatgagctggtggatctagagaaggctgtgaaagaa
ctgcttcaagagatcagtcacaaagtcaccgtctacagcacctgtctgttttaa
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integrated database retrieval system
