Cyprinus carpio (common carp): 109055667
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Entry
109055667 CDS
T05134
Symbol
lamb1a
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109055667 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109055667 (lamb1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF7652
Laminin_I
BNR_6
Motif
Other DBs
NCBI-GeneID:
109055667
NCBI-ProteinID:
XP_042609663
Ensembl:
ENSCCRG00000031694
UniProt:
A0A9Q9XX68
LinkDB
All DBs
Position
B25:17273731..17307283
Genome browser
AA seq
1875 aa
AA seq
DB search
MGEGAHETSRSVVRMRRRLAAERKKFRAALAAVKQEHSLQGSDPALQFPSKIRITAPRLK
KESRTMLLQLAALLSLGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLQ
KPEPFCIVSHLQEEKKCFVCDSRETYDESMHQVTSHRIENVVTTFAPNRLKTWWQSENGL
ENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWQVYRYFAYDCETSFPFVS
QGPMTKVDDVICDSRYSDIEPSTEGEAIFRVLDPVFRIDDPYSPRIQNMLKITNLRVKFT
KLHTLGDNLLDSRIEIKEKYYYSVYDMVVRGNCFCYGHASECAPIDGAGEVVEGMVHGHC
MCNHNTMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYQASGNVS
GGVCDDCKHNTMGHKCEQCKPFFYQHPEKDLRDPNICESCNCDPVGSLNGGVCDPLTDVS
LGLIAGQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNALGTVPGGSPCDTDSGNC
YCKRLVTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNNCSPETGQCQCREHMFGRR
CDQVESGFYFIALDHYTYEAEDAKFGPVSVLILPSVEVFEXLCTDVHVHSYGVTVVPRPQ
PQDRSPTWTGIGFVNVPEGAYLEFSIDNIPYSMEYDIIIRYEPQLPEQWEEVLMTVIRPR
VITADSRCANTMPDDDNQVVSLHPGSRYVVLSRPVCFEEGLNYTVRLSLSLYSALSDVQS
PYTLIDSIVLMPRCKNLDIFSGSGSEGGDMMTNSAWETFQRYRCLENSQAVVRTPMTDIC
RNYIFSVSAFLHQGVKACQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDKCAPATFLFGP
QGCRPCDCSPEGSVHSFCHEATGQCECIPRAYGRQCDRCLPGHWGFPNCRPCTCNGHAEQ
CDPLTGQCLSCRDHTSGHHCERCLNGYYGDPVLGSGDHCRPCMCPDGPGSGRQFSGACYK
SLDSNQVFCVCNQGYKGARCEECAPGYYGNPHEVGGECRPCQCNNNIDMTDPESCDARTG
ACLKCLYHTESEGCNRCKLGYYGNALTQSCRKCVCNHMGTAEETCPSQGNCNCDLNSGQC
QCLPNVVGLHCDQCAPDTWNMASGKGCEACDCDLNHSFSSSCNEIMGQCSCKPGFGGRTC
RECRELFWGNPEVKCHACDCDPRGIAEQQCNKVTGHCVCVEGVSGPHCDTCARGYTGEFP
HCERCHQCFAEWDVIVGDLTNQTHRLVQKVNTIKATGITGPYQATINNVENSANSIRNIL
AQNPATQPLTEIQGLLEQATXALMAEINTNLNLTEETLSEISSDNNSTDTKLKSLKEEAQ
KLEQTVKELQGQVEFVKNSDIRGARASVTRYYEQSQMAEIRANASTIDPDNLVNQSATLR
TETEDLMNQTKEEFIQRQDEFSKKLDNLAGQLETLDLSELSEKTCGSPAGSENCADSPCG
GLSCVDGEGNRKCGGEGCDGLTTLAHSAWQKAKDFDMEIISAMEEVDKLSKMVSEAKVKA
DEAKLNAQEVLAKTNETKKRVDGSNEELRQLIKQIRDFLTQDGADLESIEAVANEVLQMQ
MPTTPAQLQNLTAEIRERVGSLTEVEDILNQSAADILRAESLLEQARKARKEATDVKDTA
EMVKKALQQAERAQSSVTEALKQASADIKGTQDLLVSVESETSDSELKLSNATRRLLKLE
SDVALLKEKALNTSTSANSTEKEAESINALAEQLKKDLDSDLKDKYSSVEEQITQKAEGV
AEAKKRAEKLQKEAKNLLLQASDKLQLLKNLEKSYDENQKLLEDKANELVDLEKAVKELL
QDISHKVTVYSTCLF
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgggggagggcgcgcacgagacgagtcgaagcgtcgtgcgcatgcgcagaagattagcg
gctgagaggaaaaagtttcgggcagctctagctgcagtaaagcaggagcacagtctgcag
ggatcagacccagctctgcagtttccaagcaaaatcaggattactgccccccggctgaag
aaagaatctagaacaatgctgttacagctcgcagcccttttaagtttaggggcatgggct
ctggcagatgtgcctgagctgggagatgtttgcacagaggggagctgttatcctgccaca
ggagatcttctcattggaagagcacaccaactctcggccacctccacatgtggactccag
aaacctgagcctttttgtattgtcagtcatttgcaggaagagaagaagtgctttgtgtgc
gattccagggagacctacgatgaaagcatgcaccaagtaaccagccacagaatcgaaaat
gtcgtgactacgtttgccccgaaccgcctcaagacttggtggcagtcagaaaatggcctg
gagaacgtcacaatccagctgaacctggaggcagagttccacttcacccacctcatcatg
acctttaaaacgttcagacctgctgctatggtgatcgaacggtcgtcagacttcgggaag
acttggcaagtgtaccgttacttcgcctatgactgcgagacctcattccccttcgtctct
caaggacccatgaccaaagtggacgacgttatctgcgattcccgctactccgacattgaa
ccctcaactgagggtgaagccatctttagggttttggatccagtcttcaggattgatgat
ccctacagccccagaattcaaaacatgttaaagatcactaatctgagggtgaagttcaca
aagctgcacactcttggggacaatcttctggactcacgtatagagatcaaggagaagtac
tactactcagtctatgacatggtggtgagaggaaactgtttttgctatggtcacgcgtct
gaatgcgcccccatcgatggagctggagaggtcgtggagggcatggtccatggccattgt
atgtgtaatcataacaccatggggctgaactgtgagcgctgtcaggacttttaccatgac
ctgccctggagacctgcggagggacgcaacaccaacgcctgtaaaaagtgtaactgcaat
catcactctgattcctgtcatttcgacatggctgtgtatcaggcgtcaggtaacgtgagc
ggcggtgtgtgcgatgactgcaaacacaacaccatgggtcacaagtgtgagcagtgcaag
cccttcttctaccagcatccggagaaagacctccgcgaccccaacatctgcgagtcctgt
aactgtgatccggtcggctctctcaacggtggagtgtgtgatccgctgacagacgtgtcc
ctcggactgatcgcgggtcagtgtcgctgtaagcctaatgtggagggtgagcgctgtgac
cagtgcaaacagggccattacgggctcagcgacgaccctctgggatgccagccatgcacg
tgcaatgctttggggacggttccaggtggaagtccatgtgatacagactcaggaaactgc
tactgtaaacgtctggttaccggaaggaactgtgaccagtgtctgcctcagcactggggg
ctcagtaatgacatggatggctgcagaccatgtgactgtgatcatggtggtgcaatcaac
aacaattgctctccagaaacgggtcagtgtcagtgtcgtgagcacatgtttggcagacgc
tgcgaccaggtggagtctggtttttacttcatcgctctggaccactacacttatgaagct
gaggatgccaagtttggacctgtaagtgtcctcatattgccatctgtagaagtctttgag
taattgtgtactgacgtgcacgtgcactcttatggtgtgacagtagtcccgagaccccag
cctcaggacagatcccctacttggactggcattggtttcgtgaacgttcctgaaggtgcc
tatcttgagttcagcatcgacaacatcccctactctatggagtatgacattatcatccga
tatgaacctcagctgccagagcagtgggaggaagtgttgatgactgtcatcaggcctcgc
gtcattaccgccgacagccgctgtgcaaacacaatgcccgacgatgacaaccaggtggtg
tctctgcatcccggatccaggtatgtggtgctgtctaggcctgtgtgttttgaagagggc
ttgaactacaccgtgcgcttgagtctgtctctctactcggctctcagcgatgtgcagtca
ccgtacacgctcatcgactcgatcgtcctcatgccacgctgcaaaaacctggatattttc
tctggctctgggtcagagggtggagacatgatgaccaacagcgcctgggaaaccttccag
cgttaccgctgtttggagaacagccaagcagtggtgagaacccccatgactgatatctgc
aggaattacatcttcagcgtgtcggcttttctgcaccagggagttaaagcctgtcagtgt
gacccgcaggggtctctcagcacggtttgtgacccgagcggtggccagtgccagtgtcgg
cccaacgtggtaggcaggaactgcgacaaatgtgccccagcgaccttcctttttgggcca
caaggctgcaggccatgtgattgcagtcctgaggggtctgtccactccttctgccacgag
gccaccggtcagtgcgagtgtattcccagagcgtatgggcggcagtgtgaccgctgtctg
ccgggacactggggattccctaactgtcgcccctgcacttgcaatggccacgctgagcag
tgcgacccgctcacgggacagtgtctgtcctgcagggaccacacctctggacaccactgc
gagaggtgtttgaatggctactatggtgaccccgtcctgggctctggagaccactgccgc
ccctgcatgtgtccggacggtcccggcagcggaagacagttctccggcgcgtgttataag
agcctcgactccaaccaggtgttctgcgtctgcaaccagggatataaaggtgccaggtgt
gaagaatgcgcccctggttattacggaaacccacacgaggtgggcggagaatgccggccc
tgtcagtgcaacaacaacattgacatgacggacccggagtcctgtgatgcccgaacgggc
gcttgtctcaaatgcctgtaccacaccgagagcgagggatgcaaccgctgcaagctcggt
tattacggcaatgcactgacacagagctgcagaaagtgtgtgtgtaatcatatgggcact
gctgaggagacgtgcccctctcagggtaactgcaactgtgatttgaacagcggtcagtgt
cagtgtcttcctaacgtggtgggcctgcactgcgatcagtgcgcaccagacacttggaac
atggccagcgggaaaggctgcgaggcctgcgactgcgacctcaaccattccttcagctcg
tcctgcaatgagatcatgggccagtgctcttgtaaaccagggtttggcggcagaacctgc
cgagagtgtagagagctgttctggggaaaccctgaggtcaagtgccacgcatgtgattgt
gacccaagaggcatcgcggagcagcagtgcaacaaggtcacaggtcactgtgtttgcgtg
gaaggtgtttccgggcctcactgtgacacgtgcgctcgaggctacacgggcgagttccca
cactgcgagcgctgccaccagtgcttcgctgaatgggatgtaattgtgggcgacctcacc
aaccagacccacagactggtccagaaagtcaataccatcaaagccaccggcattacggga
ccctaccaggccaccatcaataacgttgaaaacagcgccaactcgatccgcaacatcctg
gcccagaatccagccactcagcctctgacagagatccagggtcttctcgaacaagctacg
taagccttgatggctgaaatcaacaccaatcttaacctgacagaggagaccttgtccgag
atctcatccgacaacaacagcacagacaccaaactgaaatccctcaaagaagaagctcag
aaactggaacagacggtgaaggagcttcaggggcaggtggagtttgtgaagaattcagac
attcgaggggccagagccagcgtgactcgatattatgagcagtcccagatggcagagatc
cgtgcgaatgcctccaccattgacccagacaacctggtcaatcagtctgccaccctgcgg
acagaaacggaggacttgatgaaccagaccaaagaagagttcattcaaaggcaggatgag
ttttcgaagaaactggacaacctcgctggacagctggagactctggacctgtctgaactt
agcgagaagacatgtggcagtccagctggctcagagaactgtgctgactctccctgcgga
ggcctgagctgtgtggatggggaaggaaacaggaagtgtggaggagagggatgtgatggc
ctcaccacgctggcccacagtgcctggcagaaagccaaggactttgacatggagataatc
agcgctatggaggaagtggacaagctctccaaaatggtgtcagaggcaaaggtaaaagca
gatgaagcaaagcttaatgctcaagaagtgctggcaaaaaccaatgagaccaaaaagcgt
gtggacggcagcaacgaggagctacgccaacttatcaaacagatccgagacttcctcact
caagatggagcggacctggaaagcatcgaggctgtggccaatgaagttctgcagatgcag
atgcccaccacaccagcccagctgcagaacctgaccgcagagatcagggagcgcgtgggc
agcttgacagaagtcgaggacatcctcaaccagagcgccgctgacatcctgagagcagaa
agcctgctggaacaagcccgcaaggccaggaaggaggcgacagatgtgaaggacacggct
gagatggtgaagaaggccttgcagcaggctgaacgcgcccagagttcagtaaccgaggct
ctgaagcaggccagtgctgacatcaagggaacccaagacttgctggtctcggtggagtct
gagacgtccgactcggagctaaaactgagtaacgccacccgaaggctcctgaagttggaa
agcgatgtagctctgctgaaagaaaaggctctcaacacctccaccagtgccaacagcaca
gagaaagaggctgagagcatcaacgcactggctgagcagctcaaaaaggatctggattca
gatctgaaggacaagtacagtagtgttgaggagcagatcacacagaaggctgaaggagtg
gcagaggccaagaaaagagcagagaaactccaaaaggaagccaaaaatctgctgctacaa
gccagcgacaaacttcagcttctgaaaaatcttgagaagagctatgatgaaaatcagaag
ctgctggaggacaaggccaatgagctggtggacctggagaaggctgtgaaagaactgctt
caggacatcagtcacaaagtcaccgtctacagcacctgtctgttttaa
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