KEGG   Cyprinus carpio (common carp): 109055776
Entry
109055776         CDS       T05134                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4-like
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03020  RNA polymerase
ccar03420  Nucleotide excision repair
ccar04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109055776
  09124 Replication and repair
   03420 Nucleotide excision repair
    109055776
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    109055776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccar03021]
    109055776
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109055776
Transcription machinery [BR:ccar03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109055776
  RNA polymerase III system
   RNA polymerase III
     109055776
  RNA polymerase I system
   RNA polymerase I
     109055776
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109055776
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 A2L_zn_ribbon MCM_OB DmmA-like_C DUF5816 HypA Cytochrome_C7 DZR Zn_ribbon_13
Other DBs
NCBI-GeneID: 109055776
NCBI-ProteinID: XP_018928507
UniProt: A0A9Q9Z4G6
LinkDB
Position
A19:322114..324961
AA seq 58 aa
MDSQEKIQPPKQQPMIYICGECHTENEIKARDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggattctcaggaaaagatccagcctcctaaacagcagccgatgatctatatttgtgga
gagtgtcacacagagaatgagatcaaggccagagaccccatcagatgcagagagtgtgga
tacaggatcatgtacaagaagaggaccaaaagactggttgtatttgatgcccgatga

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