KEGG   Cyprinus carpio (common carp): 109055899
Entry
109055899         CDS       T05134                                 
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109055899
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109055899
Enzymes [BR:ccar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109055899
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109055899
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    109055899
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 ResIII RING_XB3-XBAT31 zf-ANAPC11 HDA2-3 zf-Nse MS_channel_2nd Prok-RING_4 zf-RING_11 zf-rbx1 zf-RING_6
Other DBs
NCBI-GeneID: 109055899
NCBI-ProteinID: XP_042574187
UniProt: A0A9Q9VZR5
LinkDB
Position
B2:complement(14713864..14723088)
AA seq 960 aa
MQSSNKSTNINPRTAPPHNPSTSASPRYAFIDFLDVGSTMTISQEIANLTEDSGQDLPEE
NVQIGSIQGTVVGLRYYTGTVNRGEMVSLVREPQNPYDRNAVMVANVYGRQVGHIKKELA
APMAYIMDNNLARVEGVVPYGETNKFSMPVNLTFWSKEENRDAVHNQMRRHGFKLGTEFK
GYSTKTSLGRDLLGLSSKMSAIPLTAEELKNAFDKLFDDLMEDKTREMEPAEAVCTALLP
HQKQALSWMTSRENSNDLPPFWEEKSGLYFNVLTNFAVKERPEKVLGGILADDMGLGKTL
TTIALIVSNFHNGKPLPLEQSEGSSSTCKMKSTSKDHEESYQPVSSSHLKRLHADGVSAD
TIEEDVPQKKAKTTKKTVKKPANTKKGVVLLDDVDFAAALECSSSQVGPAKKSAKKGSGT
GKVPSGGSGGSGARATLIVCPLSVLSNWLDQFEQHIRADVTLKVYLYYGAERKRSVKLLS
EQDVVLTTYNVLSSDFGNKANSPLHKVNWLRVVLDEGHVVRNPNALQSKAVLELQSERRW
ILSGTPIQNSLKDLYMLMSFLKLKPFDVKEWWSRIIQRPVTMGDRVGLKNLQVLVKGITL
RRTKNSKVAGRMLVQLPERRVFVQHVTLSEEEREEYEQVRKEGRKIVGRYFEEGTIMTNY
ADVLAILVRLRQYCCHPGLVAKYTGADDPGTPNELREHLINKITLVLNSGSDEECAICLD
SLRQPVITYCAHVYCRPCICEVIRSEKEQARCPLCRAQIKTRELVEYPGEEMQAGAATGE
NWRSSSKVDALMSNLLKLRKEDPTVKSLVVSQFTRFMDLIEVPLREYGFSFIRLDGTMAQ
KTRAKAIQDFQDSSPGNPTIMLLSLKAGGVGINLTAASHVFMMDPAWNPAAEDQCVDRCH
RLGQSRDVVITKFIVKDSVEENMVKIQKKKQELVEKAFGVKKPMDLKQARMEEIRALMEI
NT seq 2883 nt   +upstreamnt  +downstreamnt
atgcagtcatcaaacaaatcaacaaacatcaatccccgcactgctcctcctcacaacccc
tccaccagcgcctcgccacgttacgccttcatagatttcctggatgtgggcagcacaatg
accatatcccaagaaatagcaaatttaacagaggattcgggacaggacctgccggaggag
aatgttcagattggatcaattcaaggcacagttgttggtctgcgctactacactggaacg
gtcaatagaggagagatggtgtccttggtgagggagccgcagaatccttatgaccgaaat
gctgtgatggtggccaatgtgtatggacgtcaggtggggcacatcaagaaagagctggca
gccccgatggcctacattatggacaacaatttggccagggtggaaggggttgtgccctat
ggagagacaaataaattttcgatgcctgtaaacctcaccttctggagcaaagaggagaac
cgagacgctgtgcataatcagatgagacgccatggtttcaaacttggcactgagttcaaa
gggtactcaacaaaaacatctttgggtagagatctgcttggtttgtcttcaaaaatgtct
gccattcctttgactgcagaagagctgaagaatgcctttgacaagctatttgatgattta
atggaggataaaaccagagaaatggagccagcagaggcggtgtgcactgccctgctccca
catcaaaagcaggcgctctcgtggatgacctctcgtgagaacagcaacgatctgccccca
ttctgggaggagaagagtggcctctactttaacgttctcactaactttgctgtaaaggaa
aggccagagaaagtgcttggtgggattttggctgatgacatggggctgggcaaaaccctc
accaccattgccttgatagtctctaatttccacaatgggaaacctctaccactagagcaa
agtgaaggatcatcttcaacttgcaaaatgaaatcgacctcaaaagaccatgaagaatca
tatcaaccagtgagttcatcccatttaaaaagactgcatgctgatggtgtcagtgctgac
actattgaggaagatgtacctcagaagaaagcaaaaaccacaaagaaaactgttaaaaag
cccgccaacaccaagaaaggagtggttttgctggatgatgtggactttgctgccgctctg
gagtgcagttcctcacaggttgggcctgcaaaaaagagtgcgaagaagggttctggcact
ggtaaggtcccatctggaggcagtgggggctcaggggccagagccactttgattgtatgt
cctctgtctgtccttagcaactggttggaccagtttgagcaacatatccgtgctgatgtc
acattaaaggtgtacctgtactatggtgcagagcgcaagcgatctgtcaaacttctgtct
gagcaagatgtggttctcacaacatacaatgtgctttcatcagattttgggaacaaagcc
aacagtcctctgcacaaagtgaactggctgagagtagtgctggacgagggtcacgtcgtc
agaaaccctaatgctcttcagagcaaagctgtactggagctgcagtcagagcgcaggtgg
atcctgtctggaacccccattcagaattccctgaaggatctctacatgttgatgtccttc
ttgaagctgaagcctttcgatgtgaaggagtggtggagtagaatcattcagagacctgtg
accatgggtgacagagttggactcaagaacttgcaagtgctggtaaagggcatcacattg
aggcgcactaagaacagtaaagtggctgggcgcatgttggtgcagctacctgaacggaga
gtgtttgtgcagcatgtgactctctctgaggaagagagggaggagtacgaacaggtcagg
aaggagggcaggaagatcgtcggcaggtatttcgaagagggaaccatcatgacaaactac
gctgatgtgctggccatcctggttcgtctgaggcagtactgctgtcaccccggccttgtg
gccaaatacacaggggcagatgatcctgggacccctaatgagctgcgggagcatctcatc
aataagatcacattggtgctgaattctggctcagacgaggagtgcgccatctgtctagac
tcccttcgtcagcctgtcatcacctactgcgctcatgtgtactgcaggccctgcatctgt
gaggtcatccgatcggagaaggagcaggccagatgtcccctgtgtcgtgctcagatcaag
accagagagctggtggagtatcctggagaagaaatgcaggctggagcagccactggggag
aactggcgatcaagttccaaagtggatgctttgatgagcaacctgttgaagctccgcaaa
gaagaccccactgtgaagagtcttgtggtttctcagtttaccagatttatggatcttata
gaggttcccttgagggaatatggattttctttcatacgactggatggcactatggctcag
aagaccagagcaaaggccattcaggattttcaagactcctctccaggaaatcccaccatc
atgttactgtcactcaaagctggaggagttgggattaatctgaccgctgcttcccacgtc
ttcatgatggatccagcctggaatcctgcagcagaagatcagtgtgttgacagatgtcat
agactgggccagagcagagatgtggtgatcactaagtttattgtgaaagactctgtggag
gagaacatggtgaagattcagaagaagaagcaggagcttgtggagaaagctttcggagtg
aaaaagccaatggacctaaaacaggcacggatggaggagatccgagccctcatggagatt
tag

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