Cyprinus carpio (common carp): 109056091
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Entry
109056091 CDS
T05134
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109056091
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109056091
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
109056091
NCBI-ProteinID:
XP_042586236
UniProt:
A0A9R0A738
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All DBs
Position
A3:complement(31578251..31638739)
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AA seq
1969 aa
AA seq
DB search
MQSFRERSGFHGNQHCYQQEPQELSRLESYRHHHSQSRQGYEPHSLAAVGMSAVGVGSKD
CYGQQTYPIYTSTSGTPTKKTYRGAKTPNQHLQAGYSNHMGTGYTAQYMNEGHLQQKWDE
SPQMTQFEQDMVGRLESGVSGSSLYLEQNMLAISQSQCHLPSQSSAPTYTSSHQQGLPPN
PAPSPLMYPQGHLHFPQHSQPPPSSSSSYMEKCNTMPHGYKGYGIPPNVQYGRQLSNHNS
LKQSGYRPQNNYGYQQTPSRSGFEQGSLQGMSGTQENLQKFQHYNQPQQNYCITDISVRS
PEQYYQTCSPSSSHSPARSVGRSPSYNSTPSPLMPNPDSFQYGQPPINPGTSSSTGLQDQ
NMLMPPHTHSSPNVNHQSQSYSGSMKERFSEKLLSNPSLWSLNALTSQVENISNNVQHLL
LSEALMANKKTSKRNHPKKEEDYRGQLKGMEESSCPDNQHGPPPSDACTISRSMTAELQE
GGYSSSTEDQMDRSYYYFGQGKGQAQTQTHSRLSLDTMSTCSLNSADDLSVRSGDSVRSL
QSVASEDNLNCDPRVQRVLTGEEPNRSLRCIRDERSPISVTAPSPMKQESNSPPDIKSSE
STLKENFEESAWTERMADEDETGQRKLSAEHECKGEVAEQKEKWLEDEKSPSLFHKINKA
VLEEGYTYETEENIYQGLQNKSDSEKENSAEMECFSELNHKCNEGTEIKSENFKPEPQTN
AEMLVKTSPSNSGTDLYLPEKEENLKSENSIETLTCTEGPVDTLEEQPPVLSHNSTEVRD
EKESLTTSDEIINNIPRPKESFSEACSTFEEMRNMPQVDTETAESFAQDTQHRSNERRSA
ICDIAPQPYTAKIGFSALNEKTTPLAKARDHHIDRSDAKVLEPDSPQLPGKSILHSAPSW
ADTPPSPKKGDEDMELGISCPSAVTPSAKTEPIAPSAHTRMFGKKHARGRRRLMHSSAGI
RRQLSVDGDSAPPSAQNPSMLSSKSTLILDQLENAHQDISSQTPKLVTESLPSRMCTRSY
GSQSSPKVCPQERKKPGPKPGPKSGSKPGVKPGPKPGPKPGPKSNLKPGPKPNPKSISKP
GPKPGPKPDVMPSVKPGLKTSLKCTGPTESAKPGPKHPLKPGPKPGPKSVSKLGSNPAAL
AREILVPKPSQTTTESKPIEVSVPKGPGRPRGITSKIKSIKQDENVPITKDHTKGTHCTH
ELILQDVTTALTLDTLVGVVDITKGETVGSTSESTLDSSCVKSLARDQKSMVLRSRKQTR
EKVTEVKEQENIKSAETPSAMFIHSQIQDVTVDQSCKTESSNLELPEQKDVSTDSLQQPN
EDVVCIKRKSSLLSSESKKRKKGVKDSEVKTQEPPSDTVTGVCTAKGKRKRGQHLQAKSV
RTTVTTDSPPTDDISDIPSVPHQCPTKTKYLPPRKGRGLKYEAMVQKITSPGSKKQPVNI
QPDIVPEESTLKPLPQVSEQKETMDIPEVTHEAGESTISTQETQNTGIQTPRKKRRKWAT
VESSDAPDVALEAGSLVINTPRLAKQRAIKNNHEMHLKQRKRRRKGIEPPESIPIVEQQE
PIQTDILPPPPHSFSLPETGEQTQYEEPPTELFLPLIKPNRGRRPSLKNKQEDLSSQTEY
DKVKEKKKPGPKKKVMNVLKVVVKKPNIKTKCSNDLSPTVKVQNLHPAVGNGKCSFRPYV
HIDSSLELASLCTIVNRPEEEQMLSQARKKSAAKLKNVVTVTKAVSNSSVMLQGPLVNKS
LIDRCLTCCLCGKPANYGELGDLCGPYYPEDFIPRKMLSSTHRNDFMQNSNCANKTEVSC
ITEQMNSQSACEKDAYQEGASEGHRGHPRRGKRAVREQLRTRPTLRMRFKRLLLQRRLRG
TSPTSGEEGNGTALQKLQMEAEVKEHWAHEACAVWTTGIILVGGKLFGLKEAVQKAAHAK
CSKCQGEGASIYCSWKSCTQRYHYVCAKEMGSTFQEETFSIRCPKHKAM
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttcagagagcggagtggtttccatggcaaccagcactgctaccagcaggaa
ccccaagaattatcacgccttgagagttatagacatcatcacagccagtccagacagggc
tatgagccacactctctagctgctgtagggatgtcagcagtgggagtgggttctaaagat
tgttatggacagcagacctatcccatctacaccagcaccagtggtactccgactaaaaaa
acatatagaggagccaaaactccaaaccagcatctgcaggctggctacagcaatcacatg
ggcactggatacacagcccagtacatgaatgaaggtcacttgcagcaaaaatgggatgag
tcacctcagatgacccaatttgagcaggacatggtgggacggctggagtctggggtcagt
gggtcatccctgtacctagagcagaacatgctagctatctctcaaagtcagtgccatcta
ccttcgcagtcctctgccccaacctatacaagttcccatcaacagggcctcccacccaat
ccagcaccatctcctttaatgtatccacagggtcaccttcatttccctcagcactcacaa
cccccgccttcatcgtcgtcatcttatatggagaaatgtaatacaatgccgcatggctac
aaaggctatggtataccacctaatgtccagtatggaagacaactcagcaatcacaacagt
ctaaagcagagtggatacagacctcagaataattatggttatcagcaaactccatcaaga
tcaggattcgaacagggttccctgcaaggaatgtctggtacacaagagaaccttcagaaa
ttccagcactacaatcagccccagcaaaactactgcataacagatatttctgtaaggtca
ccagaacaatactaccagacctgcagtccaagttctagtcattcacctgcaaggtctgtg
ggaagatctccctcatacaattccacaccatcccccttaatgccaaaccctgattcattc
cagtatggccaacctcccatcaaccctgggacttcatcatctacaggtttgcaagaccaa
aatatgctgatgccccctcatactcattcatcacccaatgtgaaccaccaatcccagagc
tattctggttccatgaaagagcgattttcggaaaagctcttgtccaaccccagtttgtgg
agcctcaacgccctgacgtctcaggttgaaaacatctccaacaatgtccaacatctgctg
ctgtctgaggcccttatggctaacaaaaagaccagcaaacgaaatcatccaaaaaaggaa
gaagattatagaggtcagttaaagggtatggaagagtcatcttgtcctgataaccaacat
ggtcctcctccatctgatgcgtgcaccatttccaggtccatgacagcagaactgcaggag
ggaggatactctagcagcactgaggaccagatggacagaagctactactattttgggcag
ggaaaaggtcaagcacaaacccagacacactcacgtctcagccttgacacaatgtctact
tgctccttaaactcagctgatgatttatccgttaggtcaggtgactcagtgcgaagtctc
cagagtgtagcatctgaggataatctcaattgtgacccaagagttcagagagtattgact
ggagaagagcccaacagatctctccgttgcattagagatgagaggtctcctatcagtgta
acagctccaagtcctatgaaacaagagagtaattcaccaccagatataaagagttcagag
agcactctaaaggagaactttgaagagtcagcatggactgagaggatggctgatgaggat
gaaactggacaaagaaagctgtctgcagagcacgagtgcaaaggagaggttgcagaacag
aaagagaagtggctggaggatgagaaaagtccttctctttttcataaaataaataaagcc
gtattagaggaaggttacacatatgaaacagaggaaaatatctaccaaggactgcaaaac
aaatctgattcagaaaaagaaaactcagcagagatggaatgtttttctgaacttaatcat
aaatgtaatgaaggcacagaaataaagtcagaaaatttcaaaccagagccacagaccaat
gctgaaatgcttgtgaaaacatcacccagcaattcaggcactgatctgtatttgccggag
aaagaagaaaatttaaagagtgagaattccatagagaccctcacatgcactgagggacca
gtggacacccttgaggagcagccgcctgtcctctcccataattccactgaggtaagagat
gaaaaggagagtctgacaacttcagatgagatcattaataatatacccagaccaaaagag
tccttttcagaagcctgtagtacatttgaggagatgcgaaacatgccacaagtcgacaca
gaaactgcagaaagctttgcccaggacacacaacacagaagcaacgaaaggaggtcagcc
atatgtgacattgcacctcagccttacactgccaagattggcttctcagctctcaatgag
aaaacaacacctttggctaaggctagagatcatcacatcgatcgtagtgatgcaaaggta
ctggagcctgactctcctcagttgccgggcaagtcaatactgcactctgcaccatcttgg
gctgacaccccaccctctcccaagaaaggggatgaggatatggaactgggcataagctgt
cccagtgcagtgactccctcagccaaaacagagcctatagccccatctgcacatacaaga
atgtttggtaagaaacatgcacggggcagaagaagactaatgcattcaagtgcgggaatc
agaaggcagttaagtgtagatggagatagtgctccaccttctgcccaaaatcctagtatg
ctctccagcaaaagcacccttattcttgatcagctggaaaatgcacaccaggatattagc
agtcaaacaccaaaacttgtgacagagagtttaccatcacggatgtgcactcgctcctat
ggttcacaaagtagcccaaaagtctgccctcaagagagaaagaaaccaggtccaaagcct
ggtccaaaatcaggttccaaaccaggtgtgaagccaggaccaaaaccaggtccaaagcct
ggcccaaaatcaaatctaaaacctggtccaaagcctaatccaaaatcaatttcaaaacct
ggtccaaaaccaggacctaaacctgatgttatgcccagtgtaaaacctggcctaaaaaca
agtttaaaatgcacaggacccacagaaagtgcaaagcctggtccaaaacatcctttaaag
ccaggtcctaaacctggtccaaaatccgtttctaaactaggctcaaatcctgcagcttta
gcaagagaaatacttgttccaaagccaagtcaaaccaccacagagtcaaagccaattgag
gtgtcagtacctaaaggtccaggccgaccaagaggaatcacctctaagatcaaatcaata
aaacaagatgaaaatgttccgattacaaaagaccataccaagggcacacactgtacacat
gaacttattttgcaagatgtgaccacagcattaactttggacacacttgttggtgttgtg
gacatcactaagggtgaaactgtgggttccacttctgaatctactctagacagcagttgt
gtgaagtccttagcaagagatcaaaagtccatggtgctgagatcacggaaacaaacaaga
gaaaaggtgactgaagttaaagagcaagagaatattaaatcagctgagacaccttcagca
atgttcatacactcacaaatacaggatgttactgtggatcagtcatgtaagaccgaatct
tcaaatcttgaattacctgagcagaaggatgtttctacagactcacttcaacaaccaaat
gaagatgtggtttgtatcaaaagaaaatccagtttactgtcctcagaaagcaaaaagaga
aagaaaggtgtgaaagatagtgaagtgaagacacaggagcctccatcagatacagtcacg
ggagtctgtactgcaaagggaaagcgtaagagaggacaacatttgcaagcaaaatctgta
aggaccactgtgaccactgatagccctcccactgatgacatcagtgacataccttctgta
cctcatcagtgtcccactaaaaccaaatatttgcctcctcggaaaggcaggggacttaaa
tatgaggcaatggtccagaaaatcacatctccggggtccaaaaagcaacctgtaaatatc
caaccagatattgtaccagaagaatcaacattaaaaccgttgccacaggtatcagagcag
aaagagacaatggacatccctgaggtgactcacgaggcgggcgagagtacaataagcaca
caagagacccaaaatacaggtattcaaactccaaggaaaaagaggagaaagtgggccact
gtagagagcagcgatgcaccagatgtagccctggaggctgggagcctcgttatcaacaca
ccaaggctagccaaacagagagccattaaaaacaaccatgagatgcatctgaagcaacgt
aagaggagaagaaaaggcattgaaccaccagaaagcatccccattgtggagcaacaggag
cctatccagactgatattttgcccccacctccacactccttctctttaccagaaacaggt
gaacagacacagtatgaggagccaccaacagaactatttttaccactaataaaacccaat
cgaggcaggcggccatctcttaaaaacaaacaggaggacctctcaagtcaaacagaatat
gacaaagtaaaggagaaaaaaaagcctggaccaaaaaaaaaggttatgaatgtcctcaaa
gttgtagtgaagaaacctaacataaagacaaaatgcagcaatgatctcagcccaacagtg
aaagtgcaaaacttgcatccagcagtgggtaacggaaaatgttcttttagaccatatgta
cacattgacagttctttggagctagcatctctttgtaccatcgtcaacaggcctgaggaa
gagcagatgctcagccaggcaagaaaaaagagtgcagctaaactgaaaaatgtagtcaca
gttaccaaggcagtatcaaactcctcagtaatgctacaagggcccttagttaacaaaagc
ctaattgacaggtgtctaacgtgctgcctatgtggaaagccagcaaattacggagagctt
ggggacttgtgcggcccctattatcctgaggacttcataccacgaaaaatgctgtcatca
acacacaggaatgatttcatgcaaaacagcaactgtgcaaataagacagaggtcagctgc
atcacagagcaaatgaactcacagagtgcatgtgagaaggatgcctatcaggaaggggca
agtgaaggacaccgtgggcatcccaggagggggaaaagggcagttagggaacagttaaga
acccgccccactttgcggatgaggttcaaaaggctgctgctgcagagaagacttagagga
acttctcccacttctggtgaggagggcaatggaacggctctgcagaaattgcagatggag
gctgaggtaaaagagcactgggcccatgaagcttgtgctgtctggaccacaggcataatc
ctggtaggaggcaaactctttgggctgaaggaggctgttcagaaagctgcacatgcaaaa
tgctccaagtgccaaggtgaaggagcttccatctactgcagctggaagagctgtactcag
aggtaccattatgtctgcgccaaagagatgggctccacatttcaagaagagaccttctct
attaggtgtccgaaacacaaggcaatgtaa
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