Cyprinus carpio (common carp): 109056304
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Entry
109056304 CDS
T05134
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109056304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109056304
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109056304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
CENP-O
FerA
Motif
Other DBs
NCBI-GeneID:
109056304
NCBI-ProteinID:
XP_018929057
Ensembl:
ENSCCRG00000045673
UniProt:
A0A9Q9V0Z4
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Position
A7:complement(24841991..24866280)
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AA seq
841 aa
AA seq
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MGEDNLVRVKHLFASRARHEAEQRQSRDYTHSQGVPVFPLTYLIIMPTTQTSPQDEQEKL
LDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELH
YLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVRSFPQSRKDILKDLVE
MCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQAEEEMTGDINDSIDFVLLNFAEMNKLWV
RMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKYKQVVLSGVLEQVVNCRD
SLAQEYLMECIIQVFPDEFHLQTLNLFLRSCADLHQNVNVKNIIIALIDRLALFAHREDG
PGIPADIKLFDIFSQQVATVIQSRQDMPSEDIVSLQVSLINLAMKCYPERVDYVDKVLGS
TVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLKHFPPLFEYFDYESRKS
MSCYVLSNILDYNTTIVTQDQVDAILNLVSTLIQDQPDQPAEDPDPEDFTDEQSLVGRFI
HLLHSDDPDQQYLILNTARKHFGAGGNQRIRHTLPPLVFAAYQLAFRYKENSSSDDKWEK
KCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYE
DEISDSKAQLAAITLIIGTFERTRCFSEENHEPLRTQCALAASKLLKKPDQCRAVSICAH
LFWSGRNTEKDGEEIRDGRRVMECLKKALKIANQCMDPSLQVQLFIEILNRYICFYEREN
DAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLQRESPESEGPAYEGLV
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggacaacctcgttcgagtaaaacacctgtttgcgagcagagctcgtcatgag
gcggaacagcggcagtcacgtgactacacacactcacagggggtcccggtgtttcctcta
acatacctaataatcatgcctaccacacagacgtcgccccaggatgagcaggagaagctg
ttggatgaagctgtgcaggcagtcaaggttcagtcttttcaaatgaagcgctgtctggac
aagaacaagctgatggatgcactgaaacatgcctcaaatatgctgggggagttgaggact
tctatgctttctcccaagagctactacgaactctacatggccatctcagatgagctgcat
tacctggaggtctatttgacagatgagtttgccaaaggccgcaaggttgcggacctctat
gagcttgttcagtatgctgggaacatcatccctagactgtacctgttgataactgtcgga
gtggtgtacgttcgctctttcccccaatcccgcaaagacatactaaaggacctagtggaa
atgtgtcgtggtgtgcagcatccactccggggcttgttcctcaggaactacctgctgcag
tgtacgcgcaacatcctgcctgatgatggagagcaggctgaggaagagatgaccggggac
attaatgactccattgactttgtactgctgaattttgcggagatgaataaattgtgggtg
cgaatgcagcatcaaggacacagtagggaccgagaaaagagagagaaggagaggcaagag
ctgcgtatccttgtagggaccaatctggtccgactgagccagctggaaggcgtcaatgtg
gaaaagtacaaacaggtcgtgttgtctggggtcttggagcaggtggtgaactgtagagac
tctctagcacaggaatacctcatggagtgcatcatacaggtctttccggatgagttccac
ctgcagacgctgaacctgttccttcgctcctgtgctgatttgcaccaaaatgtgaatgtc
aagaacatcatcattgcccttattgacagattggccttgtttgctcacagagaagatgga
cctggaatccctgctgacatcaagctatttgatattttctcacagcaagtggcaacagtc
atacagtctcgtcaggatatgccatctgaagacattgtttcgctccaagtgtccctcatt
aatctggctatgaagtgctatcctgagcgtgtggactatgtggataaagtgttgggaagt
actgtggagattttcaacaaactcaacctggagcacattgccaccagcagtgcagtgtct
aaggagttgaccaggctgctaaagattcccgtggacacgtacaataacatcctcaccgta
ctccagctcaagcattttccaccactgtttgagtacttcgattatgagtcacgcaaaagt
atgagctgctacgtgctgagcaacattctggactacaacaccaccatagtgacccaagat
caggttgatgcgatcctgaacctagtgtcgacgctgatccaggaccagccagatcagcct
gctgaggatcctgacccagaggactttacagatgaacagagcctagtgggccgcttcatt
catctgctacattcagacgaccctgaccagcagtatctgattttaaacactgccaggaaa
cactttggtgctggggggaaccagagaattcgacacactcttcccccgctggtgttcgct
gcttatcaactggccttccgttacaaagagaactcctcctcagatgataaatgggaaaag
aaatgtcagaagattttctcattcgcccatcagaccatcagtgctctgatcaaagcagag
ctggcagaattacccctgaggctcttcctccagggggctctggcggctggagagattggc
tttgaaaaccatgaaactgttgcctacgagttcatgtctcaggcgttctcactgtatgaa
gatgagataagtgactccaaggctcagctggccgccattacgctgatcattggcacgttt
gagcgcacgcggtgctttagcgaagagaaccatgagcccctgcgtacccagtgtgcactg
gctgcctccaaactgctgaagaaacccgaccagtgccgtgcggtcagcatttgtgcccac
cttttctggtcaggacgcaacactgaaaaggatggagaagagatccgtgatgggcggagg
gtgatggaatgcttgaagaaggctctgaagatcgctaaccagtgcatggacccgtccttg
caagttcagctcttcatcgagatcctcaacagatacatctgcttctatgagcgagagaat
gatgcggtgacagtccaagttctgaatcagctgatccagaagatccgtgaggatctcccg
aacctggaggccagcgaggagacggagcagattaacaaacacttccacaacacactggag
cacctgcgtctgcagagagagtcgcccgagtctgagggacctgcttacgaggggttggtg
ctgtag
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