Cyprinus carpio (common carp): 109056343
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Entry
109056343 CDS
T05134
Name
(RefSeq) uncharacterized protein LOC109056343 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109056343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109056343
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109056343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
GTP_EFTU_D4
DO-GTPase2
AAA_16
Motif
Other DBs
NCBI-GeneID:
109056343
NCBI-ProteinID:
XP_042569369
Ensembl:
ENSCCRG00000020471
UniProt:
A0A9Q9VQQ8
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All DBs
Position
A23:complement(16266042..16291650)
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AA seq
592 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCISPATAAQFIYSRQDSRQARHVETLEEAE
YEEEEEEMPTSDTVASTLDPLQQGRLYSCLDQMRAVLGDSIPDSTLTQAALKYDCDPQRA
LDFILTEENTNTHAPPARINSQPEPITTAAPQKGALFPSSHNSTKTVSSARSCKRNSNQS
YNLSDLLAMPDPNKSIPAALNPPPGLGSLGKDHLKVVSSQNLVSDGGQSTLGQSSLAQLI
AVHEQKCTNVPPLIPSTGLSLDNTVPLTTSPFGSFLGPAAPLSTMLSQGPSVPPISGLSV
GSGATLSSGLVLGTSVPAGLGVTSSSLLTCSLSSLALQDSKPSAPLPVSLGSLSSVLQSS
GLSGVPGQAKSSGSLSLAELIQEHQDNSPKLYDSLPGLQNAHNSHTTCPQNIQNLIRTSD
ANASPGFSEAPSLSVLMSQHQASLGPQLPTCTASLKSENGSNQASNKSAAAVHKPRPLSL
NQSVDLSALMSQTSPDGGSPTLLSFSHISASQKKRVFAKPSIFALAMCVRVRNEKSQRNR
ATHNAFLYSRQMERVKERVQCPPLHHITPFSFDTPSPDDIVKANQRKAFTRD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcacaggaatgtccgaggttataactacgacgaagactttgaggatgatgac
atgtacgggcagtcagtggaagatgactactgcatctctcctgccactgccgcacagttt
atctattcacgtcaagactcgaggcaggctcgacacgtagagaccctggaagaggcagaa
tatgaggaggaggaagaggagatgcccacctctgacactgttgcaagcacactagaccca
ctacagcaaggtcggttgtattcttgtttggatcagatgagagccgtgctgggagattca
attccagactccacattaactcaggcagctctgaaatatgactgtgaccctcaaagagcc
cttgattttattctaactgaggagaacaccaatacacacgcccctccagccagaatcaac
tcacagcccgagcctatcaccacagctgcaccacagaaaggagccttatttccttcatca
cacaatagtactaagactgtatcgagtgcacgttcatgcaaacgaaacagcaatcaatct
tacaacctcagtgatctgttagccatgcctgacccaaacaagtccatacctgctgctctg
aatcctccccctggtctgggaagtttgggaaaagaccatttaaaagtggtttcgagtcag
aatttggttagtgatggtgggcagtctactttaggacaaagttcactggcccaactaata
gctgtgcatgaacagaagtgtacaaatgttcctccactaattccctccactggtctctca
ttggataacacagttcccctcactactagtccttttggttcttttcttggtcctgctgcc
ccactttctacaatgctttctcagggtcctagtgtcccacctatttccggtttgtctgtt
ggctctggtgcgactctctcttctggtctcgttttgggcacatctgtcccagctggtctg
ggtgtgacatcttcatctcttttaacctgttctctcagtagtctagcgctgcaggattcc
aagccatccgcccctcttcctgtctcgttaggaagtttgagctctgtcctgcaaagcagt
ggactgtcgggagtacctgggcaagcaaagagctctggaagcctttcattggctgagctg
atccaggagcatcaggacaacagtcccaaactctatgacagtttgccaggactccaaaac
gcgcataattcacatacaacttgtcctcaaaacattcaaaaccttatccgaacatctgat
gcaaatgcttctcctggattttcagaggcaccatccctgtccgtcctcatgtcccaacac
caagcgtcacttgggccgcaactcccaacatgcactgcatcacttaagagtgaaaatggg
tctaatcaagcatcaaacaaatctgcagcagctgtacataagccccgcccactaagctta
aatcagagcgtcgatcttagcgcactcatgtcccaaacatctcccgatggtggctcacca
accctgttgagtttttcccacatctctgctagtcagaaaaaacgtgtatttgctaaaccg
tcgatttttgcattagcgatgtgtgtgcgtgtgagaaacgagaaaagtcagcgcaataga
gcgactcataatgctttcttatacagcagacagatggagagagtgaaagaacgagtgcag
tgtccacctcttcatcacatcaccccgttttctttcgacacaccctctccggatgacata
gtcaaagcgaatcagagaaaagcttttactcgagactga
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