Cyprinus carpio (common carp): 109056389
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Entry
109056389 CDS
T05134
Name
(RefSeq) brevican core protein-like isoform X1
KO
K06795
brevican
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccar00535
]
109056389
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109056389
04091 Lectins [BR:
ccar04091
]
109056389
Proteoglycans [BR:
ccar00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
109056389
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
109056389
Lectins [BR:
ccar04091
]
C-Type lectins
Lecticans
109056389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
ig
I-set
EGF_2
Motif
Other DBs
NCBI-GeneID:
109056389
NCBI-ProteinID:
XP_042597080
Ensembl:
ENSCCRG00000049008
UniProt:
A0A9Q9X8J7
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All DBs
Position
B16:complement(16986584..17003254)
Genome browser
AA seq
1289 aa
AA seq
DB search
MRSAMFLHVLLRAICLFVLSSSAILSPAADETTFLQVTIPDSPPVSAILGGSLTLPCLVS
LSRTPSLGRHAVLTQPRVKWSFLSSNKETEILVARGERVKVSELYKGRASLLNYAASSAD
LTLRLDELIHNDTGFYRCEVQHGLEDAHDQAQVKVKGVVFHYRNTSSRYAFTFDEAKDAC
EDIGAQIASPEQLLAAYHSGYEQCDAGWLSDRSVRYPIQMPREGCFGDMDGLPGVRNYGM
VDNDELYDVYCYVENIHGEVFHGSSPQRFSLSEAKTYCEQQGAQLATTGQLYAAWNDGLN
HCSPGWLADGSVRYPIVTPRERCGGSEPGVKTVYRFSNQTGFPEPQIRHDAYCFRANSNS
QTVSPIDHMATEPEDTEQHIVTLADPQEEYSVDQITQQSENEAQGAVESFSIYSTQTTSE
PEEHNHTTSPQLDEDSTYRDSTTPTSTERYLESTEVTQQKVESVPEIYIDPKHIDFTEKG
EPEIKASAVDGVKSSNHRHYQPMPDTNLQPGEPIYFIPPTEAQPETTEEPFSQPKEIDGS
KHFQPMPESNLEDEDKNHVTSEISMTTEDTTLEYDSSNATTTQHASVQSSPSTYLPKGAT
VEENAGNITETPEPDEDWGLFTHTNQSTSTSTSSTEGWLEGSGEDLTLSFTEKAEHLVTS
HKSETYGASTPETMTESFSLTHLNSISPTFTPRHEDTSADHHNAEEISTETLPVSLGAVD
DASDYSTISTTPKEIESSESSGDHDDILPVTLLTTPRPHLLGTSTTHGPVQVEINSPKEM
EGVPSESTTPSGIGIVEEELEKVEQDGLGEQPNQRITTSTELYNSAVTFSIDGSDKDEDE
SSGEREPSGNRSSVIKHPYSDVATITPSNLTDMQDLNETNSDNDDNQASTVGSMKNLEVT
FLPHGTQSPIWQTVASSTNPGEFRADVEFSGEAALTTDDIKALDVSDSTNAPINEKTTQT
QKPSTTSANNEDDDDNDYELMTKANADNTEDENDVTTTPESSTLPARPTQRVLVRTGYIS
DACLENPCKNGGTCVDSGAGHRCLCLPTYGGDFCETDLEHCEPGWEKFQGFCYKHFTKRQ
KWEVAEQHCRMSGGHLVSVMSPEEQEFINVKYREYQWTGLNDKTIEGDFRWSDGNPLLYE
NWYRGQPDSYFLSGEDCVVMVWYDDGRWSDIPCNYQLSYTCKKSIAAFCGQPPLILHAKM
FGRRQLKYRANSQVRYYCEPGFIQRQNPIITCQSNGHWEEPMITCSPVGSAYSNGEPVTW
PTGQNKEIIIEETTTKTTTPEYVDIKWNN
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagcgatgttcctgcatgtactgctgcgtgccatctgcctctttgtcttgtca
tcttctgccatcctcagtcctgcagcagatgagaccacattcttacaagtcaccattccc
gatagccccccagtgtctgccattttggggggctccttgactcttccctgcctggtgagt
ctctcccggaccccgtctttgggccgacatgctgtactgacccagccacgagtcaaatgg
agctttctttcatcaaacaaagagacagagatcttagtggcccgtggtgagagggtaaag
gtgagtgagttgtataaaggcagggcatcgctgctgaattatgctgcctcttcagctgat
ctcaccctcagactggatgaactgatacacaacgatacaggcttctaccgctgtgaagtc
cagcacggcttggaggatgctcatgaccaggcccaagtcaaagtaaaaggtgtcgtcttc
cattatcgcaatacctcaagtcgctatgccttcacttttgatgaggccaaagatgcttgt
gaagatattggagctcagattgcttctccagaacagctgctggctgcataccacagcggt
tatgagcagtgtgacgctggctggctttcagatcgctccgttagatacccaatccagatg
ccacgtgaagggtgttttggagacatggatggattaccaggcgttcgaaattatggcatg
gtggacaatgatgaactatatgatgtgtattgctatgtggagaacattcatggagaggtt
tttcatgggtcatccccacagcgcttcagcttgtcggaagctaagacatactgtgagcag
cagggagctcagctagccaccactggccaactgtatgctgcctggaatgatggtctgaac
cactgcagtcctggctggcttgctgatggaagcgttcgataccccattgtgacccctcgt
gaaaggtgtgggggttcagaacctggtgtcaagacagtttatcgttttagcaatcaaacg
ggattccctgaaccacaaattcggcatgacgcttactgcttcagagctaacagcaactct
cagacagtctcacctatagatcatatggcaacagagccagaggataccgagcagcatatt
gtgactttagcagatcctcaagaggagtatagtgtggatcagatcactcaacagtcagaa
aatgaagcacagggagctgttgagtccttctccatttatagcacacaaactacttcagaa
ccagaggaacacaaccacaccacaagccctcagttagatgaagatagcacctacagagac
tccaccaccccaaccagcacagagagatatcttgagtccactgaggtcacccagcaaaaa
gttgagtctgttccagagatttacatagatccaaaacacattgatttcacagaaaaagga
gaaccagaaataaaagcttcagcagttgatggtgttaaaagcagcaatcatagacactac
caaccaatgccagataccaacctacagccgggagagcccatctatttcatcccacctaca
gaggctcagcctgagacaacagaggaaccattctctcaaccgaaggagatagatgggtcc
aaacacttccaacccatgcctgaaagcaacctcgaggatgaagataaaaatcatgtgact
agtgagatctccatgaccactgaggacactacactggaatatgactcaagcaatgccacc
acaactcagcatgcttcagtccagtcaagtccctcaacatatctacctaaaggtgctaca
gtagaagaaaatgcaggaaatatcacagaaactccagagccagatgaagactggggtctt
tttacacacacaaatcagtcaacatcaacaagcacatccagcactgaaggttggttggag
ggttcaggtgaggatttgaccttgtcattcacagaaaaggccgaacatctggtcacctca
cataaatcagagacatatggagcatctacccctgagactatgacagagagcttctcatta
acacatctgaacagtattagcccaacttttacacccagacatgaagacacttctgcagac
catcacaatgctgaggaaatctcaactgagactcttcctgtgtctcttggtgcagttgat
gatgctagtgattattcaaccataagcacaacaccgaaggaaatcgaatcttctgaaagt
tctggtgaccatgatgacatcctgccagtcacactcttgaccaccccaagacctcacctg
ttgggcacatcaaccacacatgggcctgtacaggtagaaatcaattctccaaaggaaatg
gaaggtgtcccctctgaaagcacaactccatctggcattgggatagtggaagaagaatta
gagaaggtggagcaggatgggcttggagagcaacctaatcaacgaatcaccacatccact
gagctttataattctgctgtaactttcagcattgatggcagtgataaggatgaggatgag
tcttccggagaaagagaaccttcaggaaacaggtcttcagttattaagcatccatactca
gatgtggccaccatcactccctctaatctgacagatatgcaagaccttaatgaaacaaac
agtgataatgatgataatcaagccagcactgtgggatccatgaaaaatctggaggttaca
tttcttcctcatgggacccaaagtcccatctggcaaactgtggcgtcttccacaaaccca
ggagagttcagagcagatgttgaattcagtggggaagcagcacttaccacagatgacatc
aaagctttagatgtatctgactccaccaatgcacccatcaatgagaagacaacgcaaacc
caaaaaccatccactacatcagccaacaatgaagatgatgacgataatgattatgaactc
atgactaaagcaaacgcagacaatacagaagatgagaatgatgtcacaaccacacctgag
tcttccactctacctgccagacccacacagagagtgctggtcaggacaggctacatttca
gatgcatgtctggagaacccttgtaaaaatggaggcacctgtgtggacagtggagcaggt
cataggtgtctctgtctaccaacttatggaggagacttttgcgagacagatctagagcac
tgtgaaccaggctgggaaaagtttcaagggttttgttacaaacattttacgaaacggcag
aaatgggaggtggcagagcagcactgtcgcatgagcggaggtcacctggtctctgttatg
tcacctgaggaacaggagtttatcaatgttaaatacagagagtatcagtggaccggtctc
aatgacaagaccattgagggagatttccgttggtcagatgggaaccctctgttgtacgag
aactggtatcgtggacaaccagacagctacttcctgtcaggagaggattgtgttgtgatg
gtgtggtacgatgatgggcgttggagtgatatcccttgtaactaccagctgtcctacacg
tgcaagaaaagcattgcagcattctgtggacagccccctctcatactgcacgctaaaatg
tttggacgtcgtcaactaaagtacagggccaattcacaggtgcgctactactgtgagcca
ggcttcatccagagacaaaaccctatcatcacatgtcagagcaatggacattgggaggag
cctatgatcacttgttcaccagtgggatcagcatactcaaatggagaaccggtaacatgg
cccacaggtcagaacaaggaaataatcatagaagagacaacaacgaaaacaacaacacct
gaatatgtggatataaaatggaataattaa
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integrated database retrieval system
