Cyprinus carpio (common carp): 109056396
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Entry
109056396 CDS
T05134
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109056396
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
109056396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_14
ig
LRR_Zer-1
Ig_2
LRRNT
V-set
LRR_EndoS
C2-set_2
LRR_RPS2
LRR_9
C2-set_3
LRR_6
Sp38
Motif
Other DBs
NCBI-GeneID:
109056396
NCBI-ProteinID:
XP_018929146
Ensembl:
ENSCCRG00000049087
LinkDB
All DBs
Position
A16:complement(11845193..11857074)
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AA seq
604 aa
AA seq
DB search
MFMDLCGQWGAWTVLLLWCVNLSAADLTCPQKCTCYHDTLEVNCSSRHLTGVPEGLPSNA
KRLDLSINQLKTLAKRQFSSLSKLEDLDLSENTISMIEVETFQGLKNLRYLRIKNNRLKI
LPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWPSLE
TLNSNSLVGLNLTTLILSNCNLSAVPYAALHPLTYLQYLDLSYNPITSIQGNLLVELLRL
QELHLVGGNLLRIESGAFRGLVHFRLLNVSSNRLSTLEESVFHSVGNLQTLRLDRNPLAC
DCRLLWVMRRRRRLDFDGRQPTCSAPNQHKKAFRDFSEADLTVVFTCRQAQILNRQQQDA
SVVEGMSVRFDCKADGYPSPSITWLSAQQTALSSVGRVRVLANGSLEVRYIQVQDSGMYL
CTASNAAGNDSISVNLKVEGLPQNRTASYFSDEGWMETSLPPSTNSSARVSSPYPFDAKT
LIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggatctgtgtggccagtggggcgcatggacagtcctgctgttgtggtgcgta
aacctatcggctgctgacctcacatgcccacagaaatgcacttgttaccatgacactttg
gaggtcaactgctcctcaagacacctgacgggtgtgcctgaggggttaccaagcaatgcc
aaacgcttagatctttcaataaaccagctgaaaacactggccaagcgtcagttctccagc
ctttcaaagctagaggacctggacctaagtgagaacacaatctctatgattgaggtggaa
acatttcaggggctaaagaacctgcgatacttgagaattaagaacaaccgtctcaagatc
ctcccggttggggtcttctccggcctctccaaccttcgacgtctggatatcagtgagaat
gagatcctggtttttctggattacacattccgggacatgattaatttacagcagcttgat
gcaggagaaaacgacctggtgtttatctcgcaacgggcatttgttgggcttcaggcattg
aaggagttgaacgtggaccgcagcaatttgacctctatccccaccgaggctctgtcgcaa
cttcagagcttgaccaagctgcgcctgcgcaagctgaccataagcgtgctgcctaacaat
gcttttcgccgactgcaccagctgcgcaccttgcagatcctccactggccttctctcgag
acgttaaatagcaacagcttggttggtctgaaccttaccaccttaattttaagcaactgc
aacctcagcgccgtaccttatgctgcgctgcatcctctcacctacctgcagtaccttgac
ttgtcctacaaccccatcacctccatacagggtaaccttcttgtggagcttctgcggctc
caagagttgcacttggtaggtgggaacctgctacgtattgagtcgggtgccttcaggggt
ctggtccactttcgcctgctcaatgtgtcttcgaatcgtctgtcaacattggaagaaagc
gtcttccactccgtagggaacttgcagacactgaggctggaccgaaacccattggcttgt
gactgcaggctactctgggtcatgcgacgtcggcgacggctggatttcgatggccgccaa
cccacctgttcagctccaaatcagcacaagaaggcatttcgtgatttttcagaggctgat
ctcacagttgtatttacttgcagacaagcgcagattctgaaccgccagcagcaggatgcg
agtgtggtggagggcatgagtgtacggtttgactgcaaagcagacggctatccatcgcct
tctattacttggctgtcagcccagcagactgcacttagctctgttgggagagtacgagtg
cttgctaacgggagcttggaagtccgttacatccaagtacaggacagtggaatgtatcta
tgtactgcatctaatgcagcaggtaatgacagcatctccgtgaatctgaaagtggagggg
cttccacaaaaccgcacagcatcgtatttctcagacgagggatggatggaaacttcatta
cctccttctaccaactcgtctgcacgggtgtcaagtccttacccctttgatgctaaaacc
ctcatcattgctaccaccatgggatttctttctttcctcagctctgtggcgatctgtttt
gtgtttatgttcttttggagtcagagcaaaggtcagataaaacacactgccactatagac
tttgtgccaagatcatccatgggtggaggtggagatggtggggacactggaagattcaca
atgaagcttatttaa
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