Cyprinus carpio (common carp): 109056519
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Entry
109056519 CDS
T05134
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109056519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109056519
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109056519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
DUF7165
WD40_RFWD3
KNTC1_N
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
109056519
NCBI-ProteinID:
XP_042632055
UniProt:
A0A9Q9Z4U0
LinkDB
All DBs
Position
A19:4625474..4633652
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AA seq
510 aa
AA seq
DB search
MDSSESSARKQRKTPKRPLSEDASAAEERVKQKKHAALCATLGGEDASVRLLEELVFGAE
EQLSERLAQDSSVLLEDDSGSESPARPVVRSAVWEDEDDELDEEVDMTHRFRRDFKKSAA
ENKMTKQRLQQRLKEQFQKAMGGTPNWAEVTAKRSQKKEAGTEDEDEGEELMRRTGDFIG
SSDSLPKGIIKMKKCLNANSESPCGDQLSSVQFHPSAQIVMTAGLGPQLSVFQVDGKSNP
KIQTIHLENYPVNKALFSADGEHIVATGLRNKLFYIYDMMEGKVIPVCGVRGLNEQRVSD
FQVSPDGKYLLLSGSSGYLHLMTTKTREVIRSMKMNGSVCSAAFTSDSSKIFANSQEGEV
FIWDVQSSKCLKKFADDGCVRGTSLALSRDGLYLACGSQSGVVNIYSQKDCLHTLEPRPL
KAVMNLVTAATSLCFNSTSEILAIASRADDEANRLVHLPSFTVFSNFPRFQKKTIFRTRC
LDFSPRSGFYTVANNKGNALLFRLLHYTDF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtccgaatcttccgctagaaaacaaagaaagactccgaagaggccgctgagc
gaggatgcgagcgcggcggaggagcgtgtgaagcagaagaagcacgcggcgctgtgcgcg
acgctcggcggggaggacgcgtccgtcaggctgctggaggagctggtgttcggcgcggag
gagcagctgagcgagcgtctggcgcaggacagcagtgtgttgctggaggatgacagcggc
tccgagagcccggcgcggcccgtcgtcaggagcgctgtgtgggaggatgaggacgatgag
ctggacgaagaggttgacatgacacatcggtttcgcagagactttaaaaagagtgcagca
gagaataaaatgaccaaacagaggctacagcagcgcttaaaggagcagtttcagaaagcc
atgggcggcacacccaactgggcagaagtgaccgcgaagaggagtcagaagaaagaagct
gggactgaagatgaggatgaaggtgaagagctgatgcgcaggactggggacttcatcggc
tcgtctgacagtctgccgaagggcatcattaagatgaagaaatgcttgaatgcgaacagt
gagagtccctgcggtgatcagctgagctcagtgcagtttcacccgtccgcacagatcgtg
atgaccgcaggcctgggtcctcagctgagtgtgttccaggtggatggcaagagcaaccca
aagatccagaccatccatctggagaactatcccgtgaataaggctttgttcagtgctgat
ggggagcatatagtggcgactggactgaggaacaagctcttctacatctatgacatgatg
gaaggcaaagttatccctgtgtgtggtgtccgaggtctgaatgagcagagggtgtcggac
tttcaggtttctccagatgggaagtatcttctcctctcggggtcttcaggatatctccat
ctcatgaccacgaagaccagggaagtgatccggagcatgaagatgaatggcagtgtgtgc
tctgcggctttcaccagcgacagcagcaagatctttgccaactcccaggaaggggaggtg
ttcatctgggacgtgcagagcagtaagtgtctgaagaagtttgcggatgacggctgtgtc
agaggaacgtctcttgcgctgtcccgggacggcctgtatctggcctgtgggtctcagagc
ggcgtggtgaacatctactcgcagaaggactgtctgcacacgctggagcccaggcctctg
aaggccgtcatgaacctggtgacagcggccacctctctgtgcttcaacagcacctccgag
atcctggccatcgcttccagagcagatgatgaggccaaccggctggtccatctaccgagt
ttcacagtgttctccaatttcccacgattccaaaagaagacgatatttcgaacccgttgt
ctggatttctccccacggagtggattctacactgtggccaataataaaggcaatgctctg
ctcttcaggcttctgcattatactgacttctag
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