Cyprinus carpio (common carp): 109056843
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Entry
109056843 CDS
T05134
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109056843 (lingo1b)
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
109056843 (lingo1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_RPS2
LRR_9
V-set
Motif
Other DBs
NCBI-GeneID:
109056843
NCBI-ProteinID:
XP_018929580
Ensembl:
ENSCCRG00000016371
LinkDB
All DBs
Position
B7:28159271..28178569
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECNAQERSVVCH
RRKLIALPEGIPTDTRLLDLSKNRLKAINPEEFLNYQHLEELQLNENIISVIEPGAFSNL
LGLRILGLRNNQLKLIQLGVFTGLSNLTRLDISENKIVILLDNMFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNVTSVPTEAFSHLHNLLTLRLRHLNINIIRDFSFRRL
YRLKVLEIANWPLLETLTTKSLHGLNITTLSITNCNLTAVPYEAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCESPEFLQGKEFKDFPDVLPPNY
FTCQKSKVRDHKAIHRFVDEGTTVQFPCQADGDPAPMIMWQSPKKQFITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYTCIAVNAGGNDTRLAHLHVHSYSPNWPHQPNKTFAFISNQPND
NSANGTGATNPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKVDGESSPTEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ctggtggcgtgctggcagcccattctcatcctgatgctgggtaccgtgctgtccggctct
gccactggctgtccctctcgatgcgagtgcaatgcccaagagcgctcagtcgtgtgccat
cggcggaagctgatcgccctccccgagggaattcccactgacacacggctgttagatctc
agcaagaaccgtttgaaagccatcaacccggaggaattcctcaactatcaacacctggag
gagctacagctcaacgagaacataatttccgtcattgaaccaggggccttcagcaacctc
cttggcttgcgaatactggggctacgcaacaaccagctgaagttgattcagctgggtgtt
ttcactggcctcagtaacctcactcgattagatattagtgagaataaaattgtcattttg
ttggacaacatgtttcaagatctctacaacctgaaagaattggaggtgggggacaatgac
ctggtgttcatctctcacagagcttttcatggcctcagcagcctcgagcaactcactatg
gaaagatgcaacgtgacctctgtgccaacagaggccttcagtcatcttcacaacctgctg
accctcaggctgcggcatctcaacatcaacataattcgagacttttccttcaggaggctc
tatcgactcaaagtcttagagatagcaaactggcctcttttagaaaccttgaccacaaag
tccctccatggactaaacatcacaaccttgagcatcacaaactgcaatctcactgccgtc
ccttacgaggccattcagcacctggtataccttcgctttttcaacctgtccttcaatccg
atcgaggttgtggagggcaacaaaatgcacaatttgctgaggctccaggcatttcacttg
gttgggggccggctagtcagcattgagccttattccttcagaggactcaactatcttcgg
gttctcaatgtttccagcaatagtctaagcactttagaggagtctgccttccactcagtt
ggcaacctggagacactggctcttcacgacaaccccctggcatgcgactgtcgtctcctc
tgggtctttcgccgccgatggcgacttaacttcaaccgccagcagccatcttgtgaatcg
ccagaatttttgcagggtaaagaattcaaagatttcccggatgttctcccaccaaattat
ttcacctgccagaaatccaaggtccgggatcacaaagccattcatagatttgtggatgag
gggaccactgtccaattcccttgccaagcagatggagaccccgctcccatgattatgtgg
cagtctccaaaaaagcaattcatcactactaaaagcattggccggctgtcggtgtctcca
gacggcaccctcgaggttagatatgcccaaatacaagacaatggcacatacacctgcatt
gccgtcaatgcaggaggaaatgacacacgtttggctcacctacacgtacatagctactct
cccaattggccccatcaacccaataagacctttgccttcatctcgaaccagcccaatgat
aacagtgccaatggaactggtgcgacaaatccctttccctttgatatgaagactctcatt
atcgctaccaccatggggtttatctctttcctgggagtggtgctgttctgtctggtgctc
ttgttcctctggagccgagggaaaggcaatgccaagccaaacatcgagattgagtatgtg
ccacggaaagtagatggagaaagcagcccgactgagggatctcacaagatcagtatgaag
atgatttaa
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