Cyprinus carpio (common carp): 109056860
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Entry
109056860 CDS
T05134
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109056860 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109056860 (gtf2b)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
109056860 (gtf2b)
Prokaryotic type
Archaeal type
TFB
109056860 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
Sigma70_r4
KIF9
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
109056860
NCBI-ProteinID:
XP_018929594
Ensembl:
ENSCCRG00000021960
UniProt:
A0A8C2L9Q4
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All DBs
Position
B2:complement(13588726..13593023)
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AA seq
316 aa
AA seq
DB search
MASTSRGDSLPKVQCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
TNDPSRVGDAQNPLLNGGDLSTMISKGTGAASFDEFGNSKYQNRRTMSSADRAMLNAFKE
ITTMSDRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgtggagactctcttcccaaggtgcaatgccccaatcaccctgat
gcaatactggtggaggactacagggcaggagacatgatctgtcctgaatgtggccttgta
gtaggtgaccgtgtaattgatgtagggtcagagtggagaacgttcaccaatgagaaagca
actaatgacccctctcgtgttggtgacgctcagaaccctctcctcaacggaggagacctc
tccaccatgatcagcaaaggaacaggtgcagcaagctttgatgagtttggaaattccaag
taccagaatcggagaaccatgagcagcgcggatcgagccatgttgaatgccttcaaggag
atcaccaccatgtccgataggatcaacctccccagaaacatcatcgaccgaacaaacaac
ttgttcaaacaggtttacgaacagaagagtctgaaaggcagaagtaatgatgcgatcgct
tcagcctgtctttacattgcgtgcagacaggaaggcgtccctagaacatttaaagaaatc
tgtgccgtgtctcggatctccaagaaggagattggccgctgcttcaagcttatcctgaag
gctcttgagacgagcgtggatctcattacaaccggcgacttcatgtcacgtttctgctcc
aacttgggcttgcccaaacaggtgcagatggcggccacttatatcgccaggaaggccgtt
gaactggacttggttccaggacgtagtccgatctcagtggcagccgcagccatttacatg
gcctctcaagcgtcagctgagaagaagacacagaaagagattggggacatcgctggagtg
gcagacgtcaccatccgtcagtcctaccgtctcatttatccccgcgctgccgatctcttt
cctccagacttcaagttcgacacaccagtggataaactgcctcagctgtga
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