Cyprinus carpio (common carp): 109056911
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Entry
109056911 CDS
T05134
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109056911 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109056911 (smarcd1)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109056911 (smarcd1)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109056911 (smarcd1)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109056911 (smarcd1)
PBAF complex
109056911 (smarcd1)
GBAF(ncBAF) complex
109056911 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109056911
NCBI-ProteinID:
XP_018929643
UniProt:
A0A8C1SGC7
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MAARGGFQPATPGGGGAPMGPGPPVAGAGPGMGPGTPSGRMGPGGPQNHMYRSPMPGYPR
PGMPPANRMTPQGPPMGPPGYGSSPVSRPGMPVMDPSRKRPPPNQIQQVQQQNRNQHAKK
KKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIF
ISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIELD
KDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLARLL
GIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRLHALL
MPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNKIH
ETIETINHLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYYQP
WAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgtggtggttttcagcctgcgacacccggaggcggcggagctccgatggga
cccgggccgccggtagccggtgcagggcccggaatgggtcccggtacgccctcaggacgg
atggggcccggcggcccgcagaaccatatgtatcgatcaccgatgcccggatacccgaga
ccaggaatgcctccagccaatcgtatgacccctcagggaccccccatgggacccccaggt
tacgggtccagtccagtgtcccgccccggtatgccagtcatggacccatcccgcaagcga
ccgccgccaaatcagatccaacaggtccagcaacagaatcgcaaccaacatgccaagaag
aagaaaatggcagataaaatcctacctcagagaatcagagagcttgttcccgagtctcag
gcgtacatggacctgctagcatttgagagaaagctcgaccagaccatcatgcgcaaaaga
ctcgatattcaggaagctctcaaaagacccatcaagcaaaaaagaaaactacggatattt
atctccaacaccttcaaccctgccaaaccagatgcagaggacggtgaaggaaccgttgca
tcttgggagttgcgtgtggagggacgacttcttgaagacactgctgtgtccaagtatgaa
gccaccaagcagaagaggaagttttcttcttttttcaagtctttagtgatcgagttggac
aaagacttatatggacctgacaatcatttggtggagtggcaccgaacagccacgactcag
gagactgatggatttcaggtgaagaggcctggagatgttggcgtccgctgtactgtactg
ctcatgctggactaccagcctcctcagtttaagttggaccccagacttgcccggttgctg
gggatccacactcaaacgcggcccgtgattattcaggctctgtggcagtacgtcaagacc
cacaaactccaggaccctcacgaacgagagttcattaactgtgataaatacctccagcag
atctttgaaacccagaggatgaagttttctgagattcctcaacggctgcatgcactactg
atgcctcccgagccaatcatcatcaaccatgtcataagcgtggaccccaacgaccagaag
aagacggcgtgttatgatatagacgtggaggtggacgacaccttgaagacccagatgaac
tcttttctgctttccacagccagtcagcaagagattgcaggcctcgacaacaagattcat
gagaccatcgaaaccattaaccacctgaagactcaaagggagttcatgttgagcttcgca
cgagacccgcagggcttcatcaacgactggctccagtcgcagtgccgagacttgaagacc
atgacagatgtggttggtaacccggaggaggagaggagagccgagttctactaccaaccc
tgggctcaggaggctgtgtgccgatatttctattcaaaggttcagcaaaggagacaggag
ctggaacaggctcttggcattcgaaacacataa
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integrated database retrieval system
