Cyprinus carpio (common carp): 109056928
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Entry
109056928 CDS
T05134
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109056928
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109056928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109056928
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109056928
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109056928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109056928
NCBI-ProteinID:
XP_042575652
UniProt:
A0A9Q9W2J9
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All DBs
Position
B3:complement(12025026..12037892)
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AA seq
550 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTDDEGAKPRALYG
VEFTFDSDARVAITIYCQAFEEFSNGMAIYNPKTPALVSETVYYKRGVSQQFTLPSFKID
FSEWKEDDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQ
IVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNS
CADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMDHDEHSSSDSVP
PGFEPISLLEALNGLGAVSPGLPSAPLYDEINFSGSLSGESRQLSSPDHSGDSGGQKSKV
SKSPDSTLRSPSSPIQEEDEEKLSEMSDAQAHMLLSSSPAPTEGTAGDDAPDSLSPEDED
RLNLEEEVMNDCSSEHSSFTKTESDPPGDLSLPGLSGSTESLNTQSTCCSSQPLLGPSIH
LHMDDDELDV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaattctcagtcgaagaatcgctggtgttgaagacatcgacatccaggccaat
tctgcatacagatatcctccaaaatcaggaaactattttgccagccattttttcatggga
ggagagaagtttgacactcctcatcctgagggttacctttttggagaaaacatggatctc
aactttctcggtaaccgtccagtgcagtttccctatgttactccagcaccccatgagcca
gtcaagacattgagaagtctcgtcaatatcagaaaagactcgttacgattggtcaggtat
aaagatgatgctgatagtcctactgatgatgaaggtgcaaaaccaagggccttatatgga
gtggagttcacctttgactctgatgcacgagtggccatcactatctactgtcaggctttt
gaggaattctccaatgggatggcaatatacaacccaaaaacccctgccctggtctcagaa
accgtatattacaaaagaggggttagccagcagtttacccttccatccttcaagatcgat
ttctctgaatggaaggaagatgatctcaactttgatttagacagaggtgtttttcccatg
gtgattcaggctgtggttgatgaaggagatgattgtttgggacatgcccatgtactgctg
gcagcatttgaaagacatgttgatggcagtttctcagtcaaaccattgaaacagaaacaa
atagtggaccgtgtcagctacttgttacaggagatttatggaattgagaacaagaacaat
caagagacaaagccatctgatgatgagaacagtgacaacagcaacgagtgtgtggtgtgt
ctttcagatctgcgggacactctgattttgccctgtaggcacttgtgtctgtgtaactcc
tgcgctgatactctgcgctaccaggccaacaactgcccgatctgccgactgccgtttcga
gctcttcttcagattcgagctgtaagaaagaagcctggagcgctttctcctgtttccttc
agcccggtgctggctcagagcatggatcatgatgagcactcaagctcagactctgttccc
cctgggtttgagcccatctcgctgctggaggctttgaatggtcttggtgccgtgtcccct
ggccttccgtctgcacctctgtatgacgagatcaacttctctgggagcctgagtggagag
agcaggcagctcagctcacctgaccactctggagacagcggcggacagaagagcaaagtc
agcaagtcaccggacagcactctacgctctccatcgtcacccattcaggaggaggatgaa
gaaaaactgtcagagatgtctgatgcacaagctcacatgctgctgtccagcagtcctgcc
cccactgagggtacggctggagatgacgcccctgattcactgtctcctgaagatgaggat
cgattaaatttggaggaagaggtgatgaatgactgcagcagtgagcacagcagctttacc
aaaactgaaagtgacccgcctggagacctgtccctccctggattatctggctcaacggag
agtctgaacactcagagtacctgctgctccagccagccgctcctgggtccctcaatccat
ttgcacatggacgatgatgaactggatgtttaa
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