Cyprinus carpio (common carp): 109057197
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Entry
109057197 CDS
T05134
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109057197
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
109057197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
I-set
TSP1_spondin
CarbopepD_reg_2
Ig_2
ig
TSP1_ADAMTS
Ig_5
Motif
Other DBs
NCBI-GeneID:
109057197
NCBI-ProteinID:
XP_042567770
UniProt:
A0A9Q9VMJ0
LinkDB
All DBs
Position
A22:10084014..10099482
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AA seq
1255 aa
AA seq
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MWDFTVVTLVLSTVFVVSLAQGPIWDSSHLRRLNKTDRNRKLAYNSLVEPQTTGVTEWTS
WFNIDHPGGNGDYERLEAIRFYYRERVCSRPVAIEARTTDWVEAADTGEVVHSSLEKGFW
CINKEQPFGRSCSNYHVRFQCPPVHSYWTDWSEWTPCSATACNDVGIQVRQRKCMSTQPL
PLLLSPVCVGPHIERRECSTPPCEAMWSQWDSWSACSVTCGKGRRTRRRTCHRSSTKIQC
TGRPVEVQKCGNPCPVACKRVCPGGRPSKDCSYCMCEGQTLYGEVFSITGVPVPNATVAL
ASQAKVVRAHTDAKGQFKIDGLCTTPQTRVVIMKDKFAPVTLPVSNNSTDELWVRAILRS
SEKPYIEKHPEDKVRYEGQRATLCCRATGSPKPDKYYWYQNGTLLNRTIYKYDEDLILRD
LKPEHSGQYHCKATSLTGSIKSTSAVLTVFTKGTPACNSKPDSHLIKLPFDCKQPGTDSK
FYNAGRCPHNKCPGTLDFDMRCRDGSGFCCGVKQMDTKEISCGRYTLPIKVVSECGCQTC
VEPKVLVRGRVVSADNDEPLRFGHIYIGKERIGTTGYQGGFTIQVSPDTQRLVVNFVDPS
QKFIDTIKVFIFDKRGGAVYHDVKVMRKQEPIDINAAESNTIYLGEMKDEDPIGQLVIPP
NSFHKNTGEVYEGTVKASVTFLDPRNITMAAAAPGDLNFVDNEGDMLPLRTYGMFSVDFR
DGENQEVLGAGAVQVLLDTEHVKMQEHIPTMKLWSLNPDTGIWEEESNFKPTQNTIAGSG
RNKREERTFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMNDKFLPSEQLEGVVINLINL
EPKPGYSSNPRAWGRFDSVITGPNGACLPAFCDAQRPDAYTAYVTAIMGGEELEAAPSMP
KMNPNIIGVSQPYLGKLDYQRSDHEDPALKKTAFRINLAKPNPNNFDETSGPIYPYQSLI
ACENAPVDANHFRFFRVEKDKYEYNVVPFQESDLTSWTRDYLSWWPNPQEFRACYIKVKI
HGATEIIVRSRNLGGTHPQTRGQLYGIRDIRSTRDLHHPNTSAACLEFKCSGMLFDQGIV
DRSLISIIPQGNCRRIGINGLLQEYLIKHPPVLQNNESHAFNMLAPVDPLGHNYGIYTVT
DQNPRVAKEIAIGRCFDGTSDGFSREMKSDSGVALTFSCPKRTVNRESLFQRLQTNPGLT
LTQMAREMRESQGLQVRRGSTQMVAYPFGQQGRSQNSRATNTNRRRPAKRTQPRQ
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacttcacagtcgtgacgttggtgctgtctaccgtctttgttgtgtctctggca
caaggacccatctgggacagctcacatcttcggaggttgaacaaaacagacagaaacaga
aagctggcttacaacagcctagtggagccacagaccacaggcgtaactgagtggacatcc
tggttcaatatcgaccatccaggaggaaacggcgactacgagaggttagaagccattcgc
ttctactaccgggaaagggtctgctcacgacctgtagccatcgaggcccgtaccacggac
tgggttgaagctgcggatacgggggaggtggtccattccagtctggagaagggcttctgg
tgcatcaataaggagcagccatttggtcgcagctgctccaactaccatgtgcgattccag
tgtccaccagtccactcatactggaccgactggagtgaatggacgccttgctctgccacc
gcctgtaacgatgttggcatccaagtccgtcagaggaaatgcatgagcacgcaacctctt
ccactgcttctttcacccgtctgcgtgggacctcacatcgaacggagagagtgttcaaca
ccaccatgtgaagctatgtggagccaatgggattcatggagtgcttgctcagttacttgt
gggaagggtcgcaggacaaggcgtaggacatgtcacagatcttctactaagattcagtgt
acaggacgacctgtggaggttcaaaagtgtggaaatccatgtccagtggcatgcaaacgt
gtctgtcctgggggacgtcccagtaaggactgcagctactgtatgtgtgagggacaaaca
ctatacggagaggtcttcagtattacaggcgtcccagtgccaaatgccacagtggctctg
gctagccaagccaaggtcgtccgtgcccatactgatgccaagggtcagttcaagattgat
ggactgtgcaccaccccacagacccgagtggtcataatgaaggacaaatttgcacctgtt
actctccctgtttccaacaatagcactgatgaactctgggtacgggccatcttacgatcc
tcagaaaagccatatattgagaagcacccagaagacaaagtgcgttacgagggacaacgt
gcaaccctttgctgtagagcaacaggatcaccaaaacctgacaaatattactggtaccaa
aatggaaccttactgaatcgcacaatatacaagtacgatgaagatttgatattgcgggac
ctgaaaccagagcattcagggcaatatcactgcaaagcaactagtctgacaggcagcatc
aagtctacttcagctgtcctcactgttttcactaaaggaacaccagcatgcaactcaaaa
cctgattctcacctgatcaaattgccatttgactgcaagcagcctggaacagactccaag
ttttacaatgcaggtcgctgtccacacaacaaatgccctgggacgctggactttgacatg
cgctgcagggatggatctggcttctgctgtggggtcaaacaaatggacactaaagaaatc
agctgtggccgttacaccctgcctatcaaggttgtgagtgagtgtggctgccagacttgt
gtggagcccaaagttcttgtacggggcagggtggtgtcagcagacaatgatgaacccctg
cgctttggacacatttacatagggaaggaacggattggtaccacaggatatcagggtggg
ttcacaatccaggtgtctccagatacacagcgtcttgtggtaaactttgtggatccttct
cagaagttcattgacacaatcaaggtttttatctttgacaagagaggaggtgctgtctat
catgacgtaaaagtgatgaggaagcaggaacctattgatatcaatgctgcagaaagcaat
accatttacctaggtgaaatgaaagatgaggaccccatcggtcaactggtcatacctcca
aactctttccataaaaacacaggggaagtttacgaagggactgttaaggccagtgtcacg
ttccttgacccacgcaacattaccatggctgctgccgctcctggtgatctcaactttgta
gacaatgaaggagacatgctacctctcaggacatatggaatgttttcagtagatttccga
gatggggaaaaccaagaggttctaggagccggtgcagtccaggttctccttgatacggag
catgtaaaaatgcaggagcacatccctacaatgaaactctggtcccttaatcccgataca
ggcatttgggaggaggagagtaactttaaacccacacaaaacaccattgctggcagtggg
agaaacaaacgagaggagcgcaccttcctgataggaaatatggaaatcagggagcgtagg
ttgttcaatcttgatgtacctgagaaccgccgctgctatgtcaaagtgagggcatacatg
aacgacaagttcctgcccagtgagcaactagaaggtgtggtaataaacttgataaacctg
gagcctaagcccggctactcgtcaaatccaagggcttggggacgctttgacagtgtgata
acaggaccaaacggtgcttgtcttccagctttctgtgatgctcaaaggcctgatgcatac
actgcttacgtcacagctataatgggaggtgaggaactggaagcagccccctcaatgcca
aaaatgaacccaaacatcattggtgtatctcagccatacttagggaagttagattaccag
cgctcagatcatgaggatccagcacttaagaaaacagctttccgaatcaacctagccaaa
ccgaaccctaacaattttgatgaaacaagtggaccgatctatccctatcagagtttaatt
gcatgtgaaaatgcacctgttgatgccaaccactttcgttttttccgtgtcgaaaaagat
aaatatgagtacaatgtggtaccctttcaggagagtgacctcacatcttggactagagac
tatctttcctggtggccaaatccacaagagttcagggcttgttacatcaaagttaagatt
catggagctacagaaatcatagtaaggtcaagaaaccttggtggcactcatcctcagacc
agaggtcagttgtatggcataagagacattcgtagtacccgcgacttacaccatcctaat
acctctgctgcttgtcttgagttcaagtgcagtgggatgctctttgatcaaggtattgta
gaccggtcactcatttctatcatcccacaaggtaactgccgtcgcataggcatcaacggt
ctcctacaagagtacctgataaagcatcctcctgttcttcagaacaatgagtctcatgca
ttcaatatgttagctcctgttgacccacttggacacaattatggaatatacaccgtcaca
gaccagaacccacgtgttgccaaagagattgccattggccgctgctttgatggaacttcc
gatggtttttccagggagatgaagtcagattctggagtggcactaacattcagctgccct
aaaagaactgtgaatcgtgagagtttattccagcgcttgcaaacaaatcctggcctaaca
ctaacacagatggcacgggagatgagggagtcccagggattgcaagtcagaagagggtca
acccaaatggtggcctacccttttggtcaacagggcaggagccagaacagcagagccaca
aacactaacagaaggagacctgcaaagaggacacaaccaagacagtag
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