Cyprinus carpio (common carp): 109057499
Help
Entry
109057499 CDS
T05134
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccar01002
]
109057499
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109057499
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109057499
Enzymes [BR:
ccar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109057499
Peptidases and inhibitors [BR:
ccar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109057499
Ubiquitin system [BR:
ccar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109057499
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109057499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_9
UBA_DHX29
UBA_4
Motif
Other DBs
NCBI-GeneID:
109057499
NCBI-ProteinID:
XP_042581829
UniProt:
A0A9R0A1F1
LinkDB
All DBs
Position
B6:16394458..16423942
Genome browser
AA seq
863 aa
AA seq
DB search
MATDLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCLNSFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGGDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAILNAPSPYKKQESDSWEEEIQVSKHARSLTQQE
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKKTNFPLAVK
LDTVTPDGADVYSFDEEEAVLDPHISEHLLHFGIDMLQMQRTENGHHTDNHVQPRVSDWE
VIQEAGLKLKPVYGSGYTGIKNLANSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEDYKVFDLQQQRGISPKMFKALVS
KGHPEFSSNRQQDAHEFLLHLINLVERNSSGSENPSDVFRFLVEERVQCCQTQKVRYTQR
VDYLMQLPVPLEAASNREELIAYESKRKEAEENMRPPPEPVRARIPFTACLQAFTEPENV
PDFWSSALQAKSAGVKTSRFASFPEYMIVQIKKFTFGVDWVPKKLDVSVDVPDFLDLNRL
RATGLQAGEEELPDLTPPIVIPEDTRDSTTNNSLESPEIDESSVMQLAEMGFPLEACRKA
VYYTGNMGAEMAFNWIIAHMEEPDFAEPLAVPTYMEPDLPSPSLPTTSALDNQPPEESIS
ILTSMGFPRHHTIQALKATNNNLERALDWIFTHPDCEEESEAMSDTADTEPNDNSFSNAN
AHSDSSLSPDQDLSSPRVRDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWLIYNDHK
VCLSERPPKDLGYMYFYRRLSSC
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatctgggagagctactggtcccgtacatgcccaccattagagtaccgagg
acaggagacagggttttcaagagcgaatgcgctttttcctacgactctcctgaatcggaa
ggaggtctgtatgtgtgtttgaactcattccttggtttcggaagagaacatgtggagaga
cattaccgtaaaactggacagagtgtgtacatgcacttaaaacgacatgtgaaagagaaa
gccacaggtgctgcagggggtgccataccaagaagaaggaacggaaaagtatttttagat
ttagagcttaaccgtgattttaacggaggtgattatgagtatgaagatgaagccaagctt
gtcatatttccagaccactttgagatccctttaccaaatattgaggagttgcccgcactg
gtgacaatagcctgtgacgccatcctcaatgctccatctccgtacaaaaagcaggaatct
gattcatgggaagaggagatccaagtatctaaacatgccagaagtctcacacagcaggag
aatggggttcgaattcctcccagcggctggaagtgcgccaagtgtgaaatgagagagaac
ctgtggctaaacctgacagatggctctgtcctctgtgggaagtggttctttgatgggagc
ggagggaacggacatgcccttgagcactacaaaaaaaccaacttccccctggcagttaaa
ctcgacacagtcaccccagatggagcagatgtttattcttttgatgaagaagaagcagtg
cttgatcctcacatatcagaacatttgttacactttggaatagatatgctgcaaatgcaa
aggacagagaatggccatcatacagacaaccacgtccagcctcgtgtgagtgactgggaa
gttattcaggaggcgggtctaaagctaaagcctgtctatggctcaggatatacaggcatc
aaaaacctggccaacagctgctacctgagcaccactatgcaagtgcttttcagtattcca
gagttccagagagcgtatgttgggaacctacagagaatatttgactactcaccccttgat
cctactcaagatttcaacacacaaatggcgaaactcggtcatggacttctgtcaggccag
tactcaaaacctccaatgaaatcagaacttattgaacaggtgatgaaagaagactacaag
gtatttgacttgcagcagcaaagagggatttcacctaagatgttcaaagcgctggtcagt
aaaggacacccagagttctcctcgaaccggcaacaagatgctcatgaattcttgctgcac
ttaattaacctggtagagaggaacagttcaggctcagagaaccccagcgatgtgttccgc
ttcttagttgaggagcgagtgcagtgctgtcagacacagaaggtgcgctacacacagcga
gtggactaccttatgcagcttcctgtacccttggaggctgccagcaacagagaggagtta
atagcatatgagagtaagcggaaggaagctgaggagaacatgcgtccccctccagagccg
gtgagagcccgaatccccttcactgcctgtctgcaagccttcactgagcctgagaatgtt
ccagacttctggagctctgcactgcaagccaagtcggccggagtgaagacttctcgtttc
gcatccttcccagagtacatgatcgtgcaaataaagaagttcacatttggggtggattgg
gtgcccaaaaagttagatgtttctgtagatgtacctgatttcctggacttgaatcgcctc
cgggccacagggctacaggctggagaagaggagctgcctgaccttacacctcccattgtc
attcctgaagacaccagagacagtacaacaaacaactctttggaatctccagaaatagat
gaatcatccgtgatgcagctggcagagatgggtttccctctggaagcctgtcggaaggca
gtgtactacactgggaatatgggggcagagatggcctttaactggataatagcacacatg
gaagagccagattttgcagagcctctggcagttcccacttacatggaaccagacctgccc
agccccagcctccctactaccagtgcactagacaaccagcctccagaagagagcatctcc
atcctcacctccatgggcttccccagacatcacacaatccaggctctcaaagccacaaac
aacaacttggagcgtgcacttgactggatattcacacacccagactgtgaggaagagagt
gaggctatgtcagacaccgcagacacagagccgaacgataacagcttctcaaacgccaat
gcccacagtgactcctcactgtctccagatcaggacctgtccagcccccgtgtcagagac
ggacccgggcgttacgaactgtttgccttcatcagtcacatgggagcatccacaatgtct
ggtcattatgtgtgtcatatcaaaaaagagggcagatggctgatttacaacgaccacaaa
gtatgtttgtcagagaggccccctaaagacttgggctacatgtacttttaccggcgcctg
tcaagctgctag
DBGET
integrated database retrieval system
