Cyprinus carpio (common carp): 109057637
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Entry
109057637 CDS
T05134
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109057637
04812 Cytoskeleton proteins [BR:
ccar04812
]
109057637
Cilium and associated proteins [BR:
ccar03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109057637
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
109057637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
109057637
NCBI-ProteinID:
XP_018930407
LinkDB
All DBs
Position
Unknown
AA seq
2423 aa
AA seq
DB search
MASHKQSFQCFDTITDDPSLKPPFPHGHCSSASFRGSSGSTRLEPLEDHGCYLCADHQQA
MAMASEATGAYSNPWYHFQTHPHSQQYTVRRPTRPEEAPGQDEDHHQHHHHHHRHSRKIV
LVKNTDPSVRRTIVLHRRSLRSLALFMDEVSELMQCLIRKLYTLEGHKIDSVHSLLQCPS
ILVCVGREPFHPLLLDSFRKNSYDKLPRLNTKQRSSVCSNEKGAKKNVNFGLETKRSVIY
PKCDSSNRSARLSISSEKLFPSGLNSLPPGHRGACPHPGENTMDDDIEKRVLVNKDGSLS
MEMKVRFRLLHNETLHWSTEVKKAKSTFNESHIVPDDACSLSHGSAESCSEADSLSAGEA
DETYSTKHNQRHFEEPHCKHCCAHCQEYDIWKNPLPPDQGSVRRIRSSSSSASSRRIVCK
KASTDSIRTMSSEEYTEHVVEKATCIQRTFGQQGDSTVEQCTINHCHSRSEVRSLSPRTK
STSAVEDKPENSHVSENDENRPDVISSNLPKDQLSVQITQPVEEDERPVSVVSSSSQILA
SLKEDQDDEDVDLPLSTSRTSHGQQEDEESKDEEPNPCSTTPCKSPASPAHLSPRPPSNA
SSVGRSKRSRKLVSPVVDDEEGKSEASASPKASYGFKDLVTKDLVSPGDSESNDQLEDIQ
HKTDVQDEEKEERALSALSAKSKTSVKSLSEFSASCENENATEHFTGANSEIIEERSSSA
ISIKSNISGKSNKTNVSEVLEKDGRAPSAMSVSSQKSDKSGKNDISDNVSEEQISEVRTS
SAMSVESNISVRSKVSDVGFVEALQDNVEERAVSAVSSKANISTTFSQSKEPQSVPDGAL
EDRTEEKASSIKSGTSNKSGIKAVTNDDQTVERAPSSISIKSNISARSKMSIELSELEDQ
DRAPSSISVKSNVSHKSKSDMSEAASFQGDESLNSVKSNTPEAEAAPRTELPGERSPSSV
SSKSNISTRSRTSKNVDVDQDEAQEKEDVQERASSAISVKSTTSARSRKSETIPKSGEEM
KERAPSVMSVKSNASLKSNKSKMEEEEIENRASSALSVKSEVSILSKKSNQSDVEQMEKR
PSSAISAKSNVSVRSKGSKMSEVKGDDDQSSAAALHTSETSNECSTAPEETCKGTEKSQD
KEKRAPSALSTKSKKSKISDMADDIVAGDDLRSASALSSKSYVSVKSAVSELVTEEPLEA
QDQTEERAQSALSAQSNQSGVTVSEGVEVAEERALSVMSSKSNASERSKKSNNLKVLTAL
PQAAEHQTEERAQSALSPRSSVSTRSKKSNISDVLADELVDVKDQEEERASSALSAKSSI
SAKSKKSNASATDVKADDKGKGDRVLSAMSGRSDISTKTSISAKSKASKVSEIPPEEPDD
EEREVKAPSITKSSISEYWIAEEEVQNIERPPSSISVISDATHDENEITNDGEIQERAPS
AASAKSCSSMDDDTSQLSPSCLPNASPTEVVNEWLKKIPLDTTLCDLGDEFHDNYDSIEP
LCTSHVPSGDDNEHGSLQPSDVTKIETQNEMEDAHVVNKEGTNDKKSPEVAEGDHTQRGD
EPKMFDSSVLVMKVLLSPKLDRCNSLPEVSSVYGRKLSASAQGLLDCLANLQLLDFGPST
EDGKKEKYQELMSMLKSLWLCDPKDSEKTSGERNKHLDEEFKARSSSGVDVNSGSTGSGK
SSDNDGTQAQINTECEVLETLTKLQEVDETVEGEASEIPGSKHDSATPDIANQAQLTPET
KDTDEGKLKDDVPGSEETIKSNDSPRELIETPLSSNKSSGNNPKKEETESDRQEDTSSGS
APKQQRGQLSKSLSQDPDPVWVLNLLNKLEKQFMTHYVNAMAEFKVRWNLDDNEQLDAMI
CELQDEVRRRIQSSIDRELRKIQGRAGRPRPPKDTMSRESTIQTEQRRRRLKVMRNQSVD
PQPAKSDDDYTMTGTDFSDQRSDDEYCPCDTCLKKKMASKHVLPVEMLNSAPVMIDFDLR
RILQMKKSAPNNEKIEESANEQASEMEGENAGLEAVKEEDEKEGADKEIHTSSAHEIEDE
KQECEEGEEEDSASSSYVEDSSEKQSNRTRHLKKDVDEIAEMSANTMTVQQDEEPETDSD
LMAVKESASSCKINELGEDVANDDISEFDDTMQTDAAKEEASKEQTEEESEQQDKTADDE
TAEEGQNGGTESVEVGETTAEAVAAGENDIAGCDTAEGDTAEGEIAEDVQTAEAESTPEN
EQTSEDVTGEECETVDDVNAKEHEMAKNEVLEDGQTTEDETGEESIKDEIGEGHETSENE
IVQDEQTAKDETGEEGETVNEDTAEVEETAQSETAEEEQTAEDETVEEGETVNEDTAEVE
ETAQSETAEEGQTAGDETGEEGETVNEDTAEEHETAENETAEDGQTAGDETGEEGETVNE
DTAEEHETAAGLLAEQRQRPRIP
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcacaagcaaagctttcaatgctttgacaccatcacagacgacccatctctc
aagccccctttcccccatggacactgctcctcagcgtccttcagaggctcatccggctcg
actagactggagccgctggaggatcatggatgctatctctgtgccgatcaccagcaggcc
atggcgatggcctcagaggccacaggagcttactcaaacccatggtatcatttccagaca
catccacactctcagcagtatacagtcaggaggcccactcgacctgaggaagctcctggg
caggatgaagatcaccaccagcaccatcaccatcatcacaggcactccaggaagattgta
cttgtgaaaaacactgacccctctgtccggaggaccattgtgctgcaccgcaggagcctg
cgcagtctggcgctcttcatggacgaggtctctgaactcatgcaatgtctcatcaggaag
ctctacacactggaaggccacaagattgacagtgtgcacagtctcctgcagtgtccgagc
attttggtttgtgtaggacgtgagcctttccacccactcctgttggacagcttccggaag
aactcttacgacaaacttccaaggctgaacacaaagcaacgctctagtgtctgcagcaat
gaaaagggggccaagaaaaatgtcaactttggacttgaaactaagagaagcgtcatctat
ccaaagtgtgattcaagcaacagatcagcaagactatccatctcatctgaaaagttgttt
cccagtggacttaactcattaccaccagggcacagaggtgcttgtcctcatccaggagaa
aatacgatggatgatgacattgaaaagcgagttctagtcaacaaagacggaagcctgtca
atggagatgaaagtgcgatttcgactattacacaacgagacattgcactggtccacagaa
gtgaagaaggcaaagagcacttttaatgaatcccatattgtacctgatgatgcttgttcc
ctctcgcatggcagtgcagagagctgctcagaagcagattctctttctgctggcgaagca
gatgagacatatagcaccaaacataaccagagacactttgaagagccacattgcaagcat
tgctgcgctcactgtcaggaatatgatatctggaagaatcctttacctcctgatcaagga
tcagtaagacgcatcagatcttcaagctcgagtgcatcctcgcggagaatagtgtgcaaa
aaggcatctactgacagcatacgcacaatgtccagtgaggagtacacagagcatgtagtg
gaaaaggcaacttgcattcaacggaccttcgggcagcagggtgactccacagttgaacaa
tgtaccatcaaccattgccacagtcgaagtgaagtacgctcactgtcccctagaacaaag
agcacaagtgctgtagaagacaaacctgaaaactctcatgtatctgaaaatgacgagaac
agacctgatgtcatatcctctaacctccctaaagatcaattaagtgttcagattactcag
ccagtggaggaagatgagaggcctgtatctgttgtgagttcttcttctcaaattttagca
tcactgaaggaggatcaagatgatgaagatgttgaccttcctctgagcacctcgagaaca
tctcatggccaacaggaagacgaggagagcaaagatgaagaaccaaacccatgttctact
acaccctgtaaatctcctgcatctcctgcacatttgtcaccaagaccaccaagcaatgct
tcatctgtaggacggtcaaaaagatccagaaagttggtcagtccagtagtagatgatgaa
gaaggcaagtctgaagcatctgcttcacccaaagcatcatacggattcaaagatttggtc
acaaaggacttagtatctccaggggattctgaatcaaatgatcaattagaagacattcaa
cacaaaactgatgtgcaagatgaagaaaaagaagaaagggcactaagtgcgctgtcagcc
aaatcaaaaacttctgtgaagtcactgtctgagttttcagcttcttgtgagaatgaaaat
gccactgagcactttactggagcaaacagtgaaataatagaggagcgatcctcgagtgct
atctccataaaatccaatatctctggaaaatcaaataaaacaaatgtttcagaggtactt
gaaaaggatggaagagcacccagtgccatgtcagtaagctctcagaaatctgacaaatca
ggaaaaaatgacatctcagacaatgtgtctgaggaacaaatctctgaagtaagaacatca
agtgctatgtctgttgaatcaaatatatccgtaaggtcgaaagtatcagatgttggcttt
gttgaggctctacaagacaatgttgaggagagggccgtaagtgctgtgtcttctaaagct
aatatttccactacatttagtcagtctaaagagccacagtctgtgcctgatggggcatta
gaggacagaacagaagaaaaagcttcaagtattaaatctggaacatcaaacaagtctgga
atcaaagcagtgacaaatgatgatcaaacagtggagagggctcccagctccatttcgata
aaatcaaatatttctgcaagatctaaaatgtcaattgagctgagcgagcttgaagatcaa
gacagagcccccagcagcatttctgttaaatcaaatgtctcacataaatcaaagtctgac
atgtcagaagcagcatctttccaaggagatgaatctttaaattcagtgaaatcaaacaca
cctgaagctgaagcagctcctcgaacagagctaccaggggagagatcgccaagctctgtg
tcttcaaaatcaaatatctctacaagatccagaacatccaaaaatgttgatgtagaccaa
gacgaagcacaggaaaaagaagatgttcaggaaagagcatcaagtgctatttcagtaaag
tctactacatctgcaagatcaaggaagtctgaaacaatacccaaatcaggagaagaaatg
aaggaacgagctcctagtgttatgtcagtcaaatcaaatgcttccttaaaatcaaataag
tctaagatggaggaagaggaaatagaaaacagagcctccagtgctttgtctgttaaatct
gaagtttccatattgtcaaaaaaatctaatcagtcagacgtagagcaaatggagaaaaga
ccatcaagtgcaatatcagctaaatcaaatgtttctgtaagatctaaagggtccaaaatg
tcagaggtgaaaggagatgatgatcaatcatctgcagcagcattacatacctctgaaaca
tcaaatgaatgcagcacagcacctgaagaaacctgcaaaggcacagagaagtcacaagac
aaagagaaaagagcaccaagtgcattgtcaacaaaatccaagaaatccaaaatatctgat
atggctgatgatattgtagctggagatgatttgagatctgcaagtgcattgtcctctaaa
tcatatgtatctgtgaaatcagctgtctcagaattggtcacagaagagcctttagaagca
caggaccaaacagaagaacgggctcagagtgcattatcagcacaatccaatcagtcagga
gtgactgtaagtgagggagttgaagttgcagaggaacgggcactgagtgtcatgtcatct
aaatccaatgcttctgaaagatcaaaaaaatccaataatttaaaagtgctaactgctttg
cctcaagcagcagagcaccaaacagaggaacgagctcagagtgcattgtcacctagatca
agtgtttcaacaagatccaaaaagtccaacatttcagatgttttagctgatgagcttgtt
gatgtgaaagaccaggaagaagagagagcttcaagtgctttgtctgcaaaatccagcatt
tccgcaaagtcaaagaagtcaaatgcttctgcaacagacgtcaaagctgatgacaaagga
aaaggagacagagtactaagcgctatgtcaggaagatctgatatttctaccaaaaccagt
atctctgcaaaatccaaagcatcaaaagtttcagaaataccaccagaagagcctgatgat
gaagaaagggaagtaaaagcaccaagcattactaaatccagtatttctgaatactggatt
gctgaagaagaggttcagaatatagagagacctccaagttcaatttcagtaatatctgat
gccacacatgatgaaaatgaaattacaaatgacggtgaaatccaagaaagggctccaagt
gctgcatctgcaaaatcatgttcctctatggatgatgacacatctcagctgagtccttcc
tgcttgccaaatgcttctccaactgaggtggtgaacgagtggctgaagaaaatcccatta
gacaccaccttgtgtgatttgggcgacgaattccatgacaattatgattcgatagagcca
ctttgcacatcacatgtgccatcaggagatgataatgagcatggaagtttgcagccaagt
gatgttaccaagattgaaacacaaaatgaaatggaagatgctcatgtggtgaataaagaa
gggacaaatgacaaaaaatctcctgaagttgctgagggtgatcacacacagagaggggat
gaaccaaagatgtttgattcttcggttctggtcatgaaagtcttgttgagccccaaactc
gaccgatgcaatagcctaccagaggtatcttctgtatatggacgtaagctcagtgcatca
gcacaaggtcttctggattgtttggcaaatcttcagttgttagactttggtcctagtact
gaagacggtaaaaaggaaaaataccaggagctcatgagcatgctcaagtctctttggctt
tgtgacccaaaagacagtgagaagacatctggggaaagaaacaagcatctggatgaggaa
ttcaaagccaggtcatcctcgggggtagatgttaacagtggctcaacaggttcagggaaa
agtagtgacaatgatggcacccaagcacaaatcaacacagaatgtgaagtcctggaaacc
ctgacaaagttacaggaagttgatgaaacagtagaaggggaagcttcagaaataccagga
tcaaaacatgattcagccactccagatatagcaaatcaagctcagttaaccccagagaca
aaggacacagatgaaggaaagctaaaagatgatgtcccaggctctgaagagacaatcaag
agtaatgatagtccaagggaactcattgaaacacctctttcctcaaacaagagttctggg
aataatcccaaaaaagaggaaactgaatcagaccgtcaagaggacacaagttcaggcagt
gctccaaaacaacaaagaggtcagttatcaaaaagtctttctcaagacccagatcctgta
tgggttctgaatttattgaacaaattagaaaagcaatttatgacacattatgttaatgca
atggctgagttcaaagtccgttggaatctggatgacaacgagcaacttgatgccatgata
tgtgaattgcaagatgaagtccgcagacggatacaatcgagtatagacagggagctaagg
aaaattcaaggcagagctggaagaccaagaccaccaaaagacacaatgtcacgtgaatct
accattcaaacagagcaaaggcgaagacgtctgaaagtgatgcgcaaccaatcagttgat
ccacaacctgctaaaagtgacgatgattatacaatgacagggaccgatttcagcgatcaa
cgtagcgatgatgaatattgtccttgtgacacatgtttgaaaaagaaaatggcatccaag
catgtgttacctgtggaaatgcttaattctgcccctgtgatgatagactttgatttaaga
agaattctccagatgaagaaatcggctccaaacaatgaaaagattgaggagagtgccaat
gaacaagcaagtgagatggaaggagaaaatgcagggcttgaggctgtcaaagaggaggat
gagaaagagggggcagataaagaaattcatacttccagtgctcatgaaattgaagatgaa
aaacaagaatgtgaggagggtgaagaagaagacagtgcctctagctcttatgtagaagat
agttcagagaaacaatcaaatagaaccagacatttaaagaaagatgtggatgaaatagct
gagatgtctgctaacacaatgactgtgcaacaagatgaagagcctgagactgattctgat
ttaatggctgtcaaagaaagtgcaagcagttgtaagattaatgaattaggtgaagatgtg
gcaaatgatgacattagtgaatttgatgacacaatgcaaactgacgcagcaaaggaggaa
gcatctaaagaacaaactgaggaagaatcagaacagcaggacaagacagctgatgatgaa
actgctgaagaagggcaaaacggaggaacagaatctgttgaagtgggtgagaccactgct
gaagcagtagcagctggagagaatgacatagctggttgtgacactgcagaaggtgataca
gctgagggtgagatagcagaagatgtacaaactgcagaagcagaaagcactccagaaaat
gaacaaacttctgaagatgtaactggagaagaatgtgagactgttgatgatgtcaatgca
aaagagcatgagatggctaaaaatgaagttctggaagatggacaaactactgaagatgaa
actggagaagagtccattaaagacgagattggagaagggcatgagacatctgaaaatgaa
attgtacaagatgaacaaactgctaaagatgaaactggagaagaaggtgagactgttaat
gaagacactgcagaagttgaggagacagctcaaagtgaaactgcagaagaggaacaaact
gctgaagatgaaactgtagaagaaggtgagaccgttaatgaagacactgcagaagtggag
gagacagctcaaagtgaaactgcagaagagggacaaaccgctggagatgaaactggagaa
gaaggtgagactgttaatgaagacactgcagaagagcatgagacagctgaaaatgaaact
gcagaagatggacaaactgctggagatgaaactggagaagaaggtgagactgttaatgaa
gacactgcagaagagcatgagacagctgccggcctgctggctgaacagaggcagagacca
aggatcccgtga
DBGET
integrated database retrieval system
