Cyprinus carpio (common carp): 109057685
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Entry
109057685 CDS
T05134
Name
(RefSeq) exosome complex component CSL4-like isoform X1
KO
K07573
exosome complex component CSL4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109057685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109057685
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109057685
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109057685
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
109057685
NCBI-ProteinID:
XP_042573312
UniProt:
A0A9Q9VY34
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All DBs
Position
B1:complement(37444699..37449980)
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AA seq
201 aa
AA seq
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MSPMKLCVPVHAGERLCSTEDCIPGTGTYLRHGCIFASLAGYVLRKNEGEELPVISVVRE
TEAQLLPDVGAIVTCKVMSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVET
YKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEHAERHSV
ARTHAKEFRKVARVQPEYLQA
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccagttcacgcaggtgaaaggctctgcagcaccgag
gactgtatccccgggaccggcacgtatctgcggcacggctgcatcttcgcttcgctcgcg
ggatacgtgctgaggaagaacgagggagaggagctcccggtgatttcagtcgttagagag
acagaagcacagcttttgcctgacgtcggtgccattgtcacctgtaaggtgatgagtatc
aacccacgatttgctaaagtccacatcttatatgtggggtcgacaccgctaaaagacagg
tttagaggcacgatcagaagagaagacgtgagagcgacagagaaagacaaggtggagacg
tacaaaagcttcaggccaggcgacatcgtccttgcaaaagtgatctctttgggcgacgtg
cagtcgaactacctgctgaccacagcagagaacgagttgggcgtagttgtggcccacagc
gaggcgggcgctcagatggtgcccatcagctggtgtgagcatgcagagaggcacagtgtg
gcacgcacacacgccaaagagtttcgcaaggtggcacgggtacagccggagtacctgcag
gcctga
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