Cyprinus carpio (common carp): 109057760
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Entry
109057760 CDS
T05134
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109057760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109057760
03036 Chromosome and associated proteins [BR:
ccar03036
]
109057760
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109057760
Coactivators
SAGA/TFTC/STAGA complex
109057760
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109057760
STAGA complex
109057760
TFTC complex
109057760
SAGA complex
109057760
SLIK complex
109057760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_Vps41
RMC1_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
WD40_like
TRIP13_N
Motif
Other DBs
NCBI-GeneID:
109057760
NCBI-ProteinID:
XP_042619249
UniProt:
A0A9Q9YFH4
LinkDB
All DBs
Position
A1:complement(33307257..33313151)
Genome browser
AA seq
603 aa
AA seq
DB search
MKRVRTEQIQYAVTQYLKRRQYIDTDGSLKGAKLSQSAEEMAASLTVQTESSCANVVSAA
PCQSDPQQYETQFSRLRSFLQEAEAPLVKEVSGVLFPLFLYLHLDMARCGLKGAVDSFYS
RFHSFFQQDPEQKAIVDLLRAVVTPQDVTSNPKLCSLLDHKYVVHLTDQAYSYLLRYLQS
DDNSAICWVLSTHVQVEVTAAHRTDYQLYGAGIGAGNTTSTSSSSTTWTAGDGSEGAERV
EVTAGLPQNEVALEALQDCIKRVREGPPSLTTVCFYAFQHTDQLLNTAEVSADSRLLAAG
FDNSAVKLWSLRARKLKAGPHRVDVSKIRLACDVLEEEADDEDASGSEIKTLRAHSGPVY
RTAFLTDGSGLLSCSEDSTVRFWDLNSFTNTVLYRGHAYHVWDMDVSPCSLYFSTASHDR
TARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTG
HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGSLFKDLRGHTDSITSLSFSQDSSLVA
SASMDNSVRVWDIRSAHGTAPTDGSSSELIGQYTGSTSNILNVQFMACNLLLVTGTALEK
QEQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtgcggacagagcagatccagtacgcggtgacccagtacctgaagaggagg
cagtatatagacacagatgggtctctgaagggggccaaactctcccagtctgctgaggag
atggcagccagtctgacggtgcagacggagtccagctgtgcgaatgtggtgtccgcagcc
ccgtgtcagtcagacccgcagcagtacgaaacccagttctccagactgcgctccttcctg
caggaggcagaagcaccgttagtgaaggaggtgagcggcgtcttgtttccgctcttcctc
tacctgcacctggacatggcgcggtgtggcctaaagggggcggtagactcgttttacagt
cgcttccactccttcttccagcaggaccctgagcagaaagccatcgtagacctgctacga
gcagtcgtcacgcctcaggatgtgacctcaaaccctaaactctgctcgctcctggatcac
aagtatgtggtgcatctgacagatcaagcatacagctacctgctgcgttacctgcagagc
gatgacaacagcgccatctgctgggtgctcagcacacatgtgcaggtggaggtgacagca
gcgcaccgaaccgactaccagctgtacggcgcaggcataggagcagggaacactacctcc
acttcctcttcttccactacgtggactgcgggggatgggtcggagggggcggagcgtgtg
gaggtcacggctgggttacctcagaacgaggtggcgctggaggcgttgcaggactgcata
aagcgtgtgcgagaaggtccgccttcgctcactaccgtctgcttctacgccttccagcac
acggatcagctgctgaacacggccgaggtgtcagcggacagccgcttgctggcggccggc
ttcgataactcagccgtgaagctgtggagtctgcgggccaggaagctgaaggcaggacct
cacagggtcgacgtgtctaaaataagactcgcctgtgatgtgctggaggaggaggcagat
gatgaggatgcctcaggcagtgagataaagaccctgcgcgctcacagcggtcccgtgtac
cgcacggcgttcctgacggacggctccggactgctgtcctgttctgaggactccactgtt
cgcttctgggacctgaacagcttcacgaacaccgtcctgtaccgcggccacgcttaccac
gtctgggacatggacgtcagtccctgcagcctgtacttctccacagcgtcccacgaccgc
accgctcgcctctggagcttcgcgcgcacgtatccgctgcgtctgtacgccggccacctc
tccgacgtcgactgcgtcaaattccaccccaactccaactacgtggcgacgggctccacg
gataaaaccgtacgcctgtggagcacgcagcagggtgcgtctgtgaggttgttcaccggg
caccgcgggcccgtgctgtcgctcgcattctcgcccaacggcaagtacctggcctcggcc
ggagaggaccagagactgaagctgtgggatctagcatccggcagtctgttcaaagacctg
cggggtcacaccgacagcatcaccagcctctccttcagccaggacagcagtctggtggcc
tccgcctccatggacaactccgtgcgagtgtgggacatacgcagcgcccacggcaccgcc
cccaccgacggctccagcagcgagctgattggacagtacacgggcagcactagcaacatc
ctcaatgtgcagttcatggcctgtaacctgctgctggtgacgggcactgcgctggagaaa
caggaacagtga
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