Cyprinus carpio (common carp): 109057767
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Entry
109057767 CDS
T05134
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109057767
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109057767
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109057767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
109057767
NCBI-ProteinID:
XP_042591935
UniProt:
A0A9Q9WYP2
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All DBs
Position
B12:23613188..23624958
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AA seq
733 aa
AA seq
DB search
MTANSEISEGELQREEESDDLFEFGDDLELNQFDGLPYSSRYYRLLQERKTLPVWKYRHE
FMTLLEKNQILIVSGTTKTGKSTQIPQWCAELCLSAQYQHGVVVCSQIQRRQAVDLALRV
ADEMDVNIGHEIGYSIPLETCCSDDTILRYCTDDVLLGEMMSDPMLEHYGVVVIDQAHER
TVSTDVLLGLLREVLLQRPELKVVVLSAPPASETLLTHYGNVPRLHLDAPCAGEVIHSNS
SSAEVFYSALRLTLEVHRSREPGDVAVFLASEQEVLCACNILTKEASRMSVSLGELKALP
LCPRYSGMCPPITESPQTSRRVFVSCSQSEDLFWLVDTVTFVIDTGVEKRLVYNPRVRAS
SEVIRPISKCQAEIRKRLTGATGKCFCLYPEDVQLPAEIPPRILESNITSTVLYLKRMET
AGIGHCDFISRPDPEGLMQALEELDYLAALDNDGNLSEMGIIMSELPLDPQMAKALLASC
EFDCASEMLTIAAMLTAPSCFMEPPVGMVTEVMRCHMKLQHPEGDHFTLINIYNTFKRSQ
KEPYFSQEQWCEEYFLCCDALQTADAIRAQLTDILKRIELPVSEAAFGTKTNALNIKRAL
LAGYFMQIARDVDGSGNYFMLLNKHVAQVHRLSAYGAKAHALGLPEWVLFHEYNLSDNNC
IRTVTQISPQAFLQMAPQYFFCNLPPSESKEILQQILDSDRTGTARRTKPQPAAPETKTE
TAEAESHDRCIIQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaacagcgagatctcagaaggagaactccagagagaggaggaatctgatgat
ctgtttgagtttggagatgatctggagctcaatcagtttgatggactgccgtattcctcc
agatactacagactcctgcaggagaggaaaactctgcctgtttggaaatacagacatgaa
ttcatgactttgctggagaagaatcagattcttatagtctctggcacaacaaagactggc
aaaagcacacagatccctcagtggtgtgcggagttgtgtctgtctgcgcagtaccagcac
ggtgtggtggtgtgcagtcagatccagagacggcaggctgttgatttggccctccgtgtt
gcagacgagatggacgtaaacatcggccacgagattggatacagcatcccgctggagacg
tgctgctccgacgatactattctcaggtactgcactgatgacgtcctgctgggggagatg
atgtcagaccccatgctggagcattatggggtggtggtgatagaccaggcccacgagagg
accgtgagcactgatgttctgctgggtctgctgagagaggtgcttctccagcggcccgag
ctcaaggtggtggtgctgtccgcccctcctgcttcagaaacgctcctcacgcactacggg
aacgtcccacgcctgcacctggacgccccgtgcgctggtgaagtgatccacagcaacagc
agcagcgctgaagtcttctattctgctctgagactcacgctggaggtccatcggtccaga
gagccaggagacgtagctgtgtttctagcttcagagcaggaggtgctctgtgcctgtaat
attctcactaaagaagcatccaggatgagtgtatctctgggagagctgaaagcacttccg
ctgtgtcccagatactccggaatgtgtccaccaatcacagaaagcccacagacgagtagg
cgggtctttgtttcctgtagccaatcagaggatctgttctggctggtggacaccgttact
tttgtcatcgatactggagtagagaagagattagtgtataacccacgagtgagagccagt
tcagaggtcatccgacccatcagtaaatgtcaagcagaaatccgtaaacgactgaccgga
gcaacagggaagtgcttctgtttgtatcctgaggacgttcagctgcccgctgagatccct
cctcgcattctggagtccaacatcacgtcaacagtgctctatctgaagaggatggagacg
gccgggatcggacactgtgacttcatcagcagacctgatcccgagggcctcatgcaggcg
ttggaggagctcgattatctcgctgctttggacaacgacggaaacctgtctgagatgggc
atcatcatgtcagagcttcctctggatccgcagatggccaaggctctgttagcgtcctgc
gagtttgactgcgctagcgagatgctaaccatcgcggcaatgctcacagcaccaagctgc
ttcatggagcctcccgtcggcatggtaacagaagtcatgcgctgtcatatgaagctccag
catcccgagggcgaccacttcaccctcatcaacatctacaacaccttcaaacgcagccag
aaggaaccatatttcagtcaggagcagtggtgtgaggagtacttcctgtgctgtgacgcc
ctgcagaccgcagacgccatcagagctcaactcacagacatcctcaaacgcatcgagctg
cccgtttcagaagcagccttcggcaccaaaaccaacgcactcaacatcaagagagcgctg
ctcgcgggctacttcatgcagatcgccagagatgtggacggttcggggaattacttcatg
ctgctgaacaaacacgtggctcaggttcaccgtctgtcggcttacggagcgaaggctcat
gcactgggtctgccggagtgggttctgttccacgagtacaacctctccgacaacaactgc
atccgcaccgtcacacagatctcaccgcaggcgtttcttcaaatggcaccgcagtatttt
ttctgtaatctgccacctagtgagagtaaagagatcctgcagcagattctggacagcgac
aggacggggactgcaagaagaacaaaacctcaaccggccgccccagaaacaaagaccgag
acggcagaagctgaatcacatgaccgatgcatcatacagtga
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