Cyprinus carpio (common carp): 109057825
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Entry
109057825 CDS
T05134
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109057825
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccar01009
]
109057825
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109057825
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109057825
Protein phosphatases and associated proteins [BR:
ccar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109057825
Membrane trafficking [BR:
ccar04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109057825
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109057825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
109057825
NCBI-ProteinID:
XP_042570582
Ensembl:
ENSCCRG00000014256
ENSCCRG00000016855
UniProt:
A0A9Q9VSW3
LinkDB
All DBs
Position
A24:21426567..21445496
Genome browser
AA seq
1649 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAIQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILSDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCLFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDTAYTNYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRQSYRESLEKSSSPHPSTTDEEDKNEDEEVG
DASTQSAVLCPADSQKNRKSLSPVSASGEALSQGSSSPQDRLKSSCSLKAALEEEEESPE
RGATPSFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRETITKLDNQ
NMKAIKGLEDRLYALDQMIASCKRLVNEQQELAQGFHANQKRAENLKDTSVLPDLCLSHA
NQLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLT
ELLERVRVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWASALVKDGKNLYEAEKVQRET
FGKLFRKSFLRNRLFRGLDSWPPSSFCTRKPRKFDFELPDISLSDLQYLKSCCPSEVQPY
LRVPTLCDFEPLNQHVEVLHRLVQAAQSVDEMSKTITDLLNEQKVSCSQSAQRSTALPHR
SESTTEITSTSTKTLSTLSLKAPDCQPLALPGPLEDLSPDSIDAQTFDFETIGHPNMDPV
LQQGSLDLDSLAASPESDFMSAVNEFVIEENLMSPNPISDPTSPEMMVESLYSSVINAID
SKRIKDTTTLQKENSKIAALKLSADRYRSAAEESQNSLRKVKDDLYHFRGLVLKEQRDFG
FALKTMNIEVRNALNSVTYCHEEDLRRTQQTNLQSLKDEHEKQMQTLLEELEGNRKIVRD
VQRAMLELEGLVERKEKEISQLESERARSMQELQDLHKQTLLDLEQKLLKQSEELKAALF
SKNELAGQLDNLHIEIEHSQQKIRQEMEKAEKVHLQELETRLTQQHEAELESLRLEKESA
LDRLVQENLVKLRDLMDSHSAELKEREGRLKDLDARITELADARCKLEVEMALKEAEMED
MRLQYEEAKSTQEEVLRAELTSQTTTLQTQIDMLNQQVQQKNEEYEVGLAELRALMRLEK
DHCISELVDRHEEESTLLRHEFSALKQKSQDAEKDCEERVQKIQRDHQDQLDALQREKKD
EQRAFQEKERELSTVIGDLQAENALLSGRLEQERVEALQRVEKEKEEAVKAALQEALRDF
QLQKEENETRLLGQIELLENQLKERQSIDTVAPTVEKTETGVETSTALSLESGQWTEERA
SLLAQLELLERTKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQLINDLTEKLKNLTQQ
QEKDKGLIETLSEDRASILQEKKQMEEELNRLRSTVLVSSSFFPPNPIPVFTEAHGACGP
AHAEALSPSTPDPERLASMAAFKDEERVESAVEASMMTVHDNPMLSEEKQRILMLERTLH
MKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTL
YFLHSESLTALDLKPGQAHTQQEDLLKRPINSITVLLQQDATGATRRPWVLGKVMEKEYC
QAKKALNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgtttcaagtcaacaacggaagcacattgacatttgacactgaactc
gctgtccaaactgttttggaccttaaacatgccattcaggccaaatataaaattgcaatc
cagcaccaggtgctggtggtcaatggaggggagtgtatggtggcagagaggcgcgtgtgc
agctacagcgccggaacagacaccaacccaatcttcttattcaacaaagagatgatcctg
tctgaccgagctccaaccattcccaaaacgaccttctcaatagagaatgagatggagctg
aaggtggaggagtcgctcatgatgcctgctgtctttcacaccgtcgcctcccgcactcaa
ctggctgtggaaatgtttgaggttgccaagaagctttgcttgttctgtgagcgtctggtc
catgacgaacaccttcagcaccagggatgggcggccatcatggctaacctggacgactgc
actctgtcctatcagaaacttcttatgaaatttgacactgcttatacaaattaccaacag
gattttgaagacatcaaattaaaactcacaaagcttggcactgctgtctcagtcatggcg
aagattccactgctagagtgtttgactcggcagagctaccgtgaaagcctggagaaatcc
agctcccctcatccaagtacaacagatgaagaagacaagaatgaggatgaagaagtagga
gatgcatccactcagtccgcagtcctctgtcccgctgacagccagaagaatcgaaagtca
ctctcgccggtctctgcttcaggggaagcgttgtcccaggggtcctcctctcctcaggac
agactgaagagcagctgtagtctaaaagcagctctagaggaagaggaggagtctccagag
aggggagccacaccctctttcaatgtcacactgttggattggatcaatgttcaggacaga
cctaacgatgtagagtcagtagtgaggaagtgtttcgactcaatcaacaggctcgaccca
cgaattatccaaccctttctaactgaatgccgtgagacgattaccaaattggataatcag
aacatgaaggccatcaaaggtcttgaggacaggttgtatgctcttgaccaaatgatagca
agctgtaaacggttggtcaatgaacagcaggaacttgctcagggatttcatgccaatcag
aagagggctgaaaacctgaaggacacctcggtgctgcctgacctgtgtctgagtcatgcc
aatcagctgatgatcatgctaaccaatcacaggaagctactagacatcaagcagaaatgt
accactgccaaacaggagctcgccaacaaccttcaagttcgactcaaatggtgctgctac
gtgatgcttcacgctgatcaggatggagagaagctgcaggctctcctgaggctgctgacg
gagctgctggagcgtgtgcgggtggtggaggcactcagcactgtgccacagatgtactgt
ctcgccgtagtggaggtggtcaggcgcaaaatgttcataggacactacagacaatgggcc
agtgctcttgtcaaagatgggaaaaacctctatgaggcagaaaaagtacaaagggaaacc
tttgggaagctcttcaggaaatcgttcctcagaaaccggttgtttcgaggactggactca
tggccaccctcttcgttttgcacccgaaagcctcgaaagtttgactttgagcttccagat
atttccctgagtgacctgcagtatctcaagtcctgttgtccttccgaggttcagccttac
ctcagggtccccacactgtgtgactttgagcctcttaaccagcatgttgaggttctccat
cggctggttcaggctgcgcagagtgtggacgagatgtcaaaaacgatcactgacctacta
aatgaacaaaaggtttcctgtagccagagtgctcaaagatccaccgcattaccacacaga
tctgaaagcacaactgaaatcacctctacctccaccaaaacattgtccactctcagttta
aaagcaccggactgccaacccctggctcttcctggtcccttggaggacctgtcacccgac
agcatagatgcccagacctttgactttgaaaccattgggcaccccaatatggatcctgta
ttacagcaaggctctttggacttggactcattggcagcaagtcctgaatcggatttcatg
tcagcagttaatgagtttgttattgaggagaacttgatgtcacctaatcccatcagtgat
cccacaagcccagagatgatggtggagtctctttactcctctgtcattaatgcaatcgat
agcaagcgcataaaggacactactacgctccagaaggaaaattcaaagattgcagcactc
aagctgtcagcggacaggtaccgttctgctgcggaagagtcacagaacagtttaaggaaa
gttaaagatgacctttaccactttcgaggtctggttctgaaggagcaacgagactttgga
tttgccctgaaaacaatgaacattgaggtcagaaatgctctcaacagtgtcacatactgt
catgaggaagacctaagacgaacgcaacaaaccaatctccagagtttgaaagacgaacat
gaaaagcagatgcaaaccctgctggaagagctggaaggcaatcggaagattgttcgagac
gtccagagagcaatgctggaattggaggggctcgtggagcgcaaggagaaggaaatatcc
cagctggaaagtgagagagcacgctctatgcaagaactccaagatcttcacaagcaaact
ttgctggaccttgaacagaagctcttaaagcaaagtgaagaactgaaagctgcgttgttc
tccaagaacgaactcgctgggcagctggacaatctgcacattgagatcgagcacagccag
cagaaaatcagacaggagatggagaaggcagagaaggtgcaccttcaggaactggagact
cggttgacacaacaacatgaagcagagctggaatctctcaggttggaaaaagaaagtgca
cttgacagacttgtccaggagaacctagtgaagctaagagatctcatggattcccattct
gctgaactcaaggaacgtgagggacgcttgaaagacttggatgctcgcattactgaactt
gcagacgcccgctgcaaactggaagtggagatggctcttaaagaggctgaaatggaggac
atgagactccagtacgaggaggccaaaagcacccaagaggaagtgttgagagcagagctt
acttcccaaacaaccaccttgcagacgcaaatcgacatgttgaaccagcaggtccagcag
aagaatgaagagtacgaggtgggcctggccgagctccgagcgctcatgaggttggagaag
gaccactgcatctctgaacttgtggatcggcatgaagaggagagcaccctgctccgccac
gagttttcagcactcaagcagaaatcgcaggacgcagagaaagactgtgaggaacgagtc
cagaagatccagcgtgatcaccaggaccagcttgatgccttacagagggaaaagaaggat
gagcagagggctttccaggagaaagagcgagagctatcgactgttatcggagacctgcag
gcggaaaacgcactactgtcgggaagactggaacaggaaagggtggaggcactgcagagg
gtggagaaggagaaagaggaggcagtcaaagctgcattacaagaggccttaagagacttt
caactccaaaaagaggagaatgagacaagactgttaggacaaattgaactacttgaaaat
cagcttaaagaaagacagtccattgacacagtggcacctactgtagaaaagacagagact
ggtgtggagaccagcactgcgttgtcactggagagtggccagtggaccgaggaaagggca
tcgctcctggcccaactagagctcctggaacgcacaaagaacgaggagatgcagaacctg
aagacctcgctcattgctgaacagcagacaaacttcaatactgttctgacccgggagaaa
ctaaagaaagaacaactcatcaatgatctcactgagaagctcaaaaacttgacgcagcaa
caagagaaagataaaggcctgatcgaaacgctctccgaggaccgtgcctccatccttcag
gagaagaagcagatggaggaggaactcaaccgtctgagaagcaccgtcctcgtctcttca
tccttctttccacccaatcccatcccggtcttcacggaagctcacggcgcctgtggcccc
gcccatgctgaagcgctctcgccgtccacccctgatccagagagattggcgtccatggct
gcattcaaggacgaggagagggtggagtcagccgtggaggccagcatgatgacagtgcat
gacaaccctatgctgtctgaagagaaacagcgcatactgatgttggaaaggaccttacat
atgaaggaggaagagaacaaaagacttagtcaaagattgatgtcacagagtatgtcgtcc
gtctcgtcacggcactcggagaaaatcgccattcgagattttcaggtgggcgacttggtt
ctcataatcctggacgaaaggcacgataattacgttctcttcactgttggtcccaccctt
tatttcctgcactcagagtctctcactgcactggacctcaaaccaggtcaggcacacaca
caacaggaagacttattaaagagaccgattaattcaataacagttctgctccaacaagat
gcgacaggagcaacaagacggccatgggttctaggaaaagtcatggagaaggaatattgc
caagccaaaaaggccctaaaccggttcaaagttcctctcggcactaaattctacagagta
aaggccgtgccatggaacaagaaagtgtaa
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integrated database retrieval system
