Cyprinus carpio (common carp): 109057860
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Entry
109057860 CDS
T05134
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109057860
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109057860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
SNAD4
Motif
Other DBs
NCBI-GeneID:
109057860
NCBI-ProteinID:
XP_042567674
Ensembl:
ENSCCRG00000016778
ENSCCRG00000020488
UniProt:
A0A9Q9VMG2
LinkDB
All DBs
Position
A22:complement(6435808..6459309)
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AA seq
749 aa
AA seq
DB search
MGAYYCLVRRRFKRRRKKRSERKGIISTTMNEVGAGGRPRGQQKLCSLDVDEEKRMSSCS
MDVKENRNLDNLSSKDVLGEGPHLANGNARGLSRKRPLEEGNKGHGHSKFRPKKRRKPQG
PVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFIMTIEVNGQLFEGSGPTKKKAKLNAA
ERALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETPAPPEDPFYLSLS
SNGSLCSLNEFSLPMALKNNNRSYPSLQLPPALTTPPTGSGKNAVMILNELRPGLKYEFV
AESGESHAKNFTMAVTVDTQMFQGSGRNKKLAKARAAQAALSGLFNMQLDQTPSRQPIPR
EGLQLHLPQVLADAVSRLVVEKFSELTDNFTSPHARRKVLAGVVMTTGTDVKDAQVICVT
TGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYSQLEYFLSDSTEEHEKSIFRWCSE
HGYRLKDDIQFHLYISTSPCGDARIFSPHEAGAEDQGDRHPNRKARGQLRTKIESGEGTI
PVRTSNTIQTWDGVLQGERLLTMSCSDKIARWNMIGVQGSLLSHFTEPIYFSSLILGSLY
HADHLSRAVYQRIADMDDLPKPFALNRPLLSGISNTEARQPGKAPNFSVNWTVGDQGLEI
INATTGKDDLGRPSHLCKHALYSRWVCLHAKLSETLRIQGSRQGSYHEAKQAAVEYHAAK
QTLFNAFYKAGLGAWVEKPIEQDQFSLTS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgtattactgcctcgttcgcaggaggttcaagagaagacgcaaaaaacgatcc
gaacgcaaagggatcatcagcaccacaatgaatgaagtaggagccggtgggcggcccagg
gggcagcagaagctctgcagtctggatgtggatgaagagaagcgcatgagttcgtgtagc
atggacgttaaagaaaaccgcaacctggacaacctctcctccaaagacgtgctgggggag
gggcctcacttagctaatggaaacgctcggggattgagcaggaaacgccctctggaggag
ggcaacaaaggccacggacattccaaattccggcctaagaagcgaaggaaaccgcaaggg
ccagtcttgccgaaaaatgctctcatgcaactgaacgaaatcaaaccgggactgcagtac
aaacttctgtctcagacggggccggtacatgcacctgtcttcattatgaccattgaggtt
aatggacagttatttgagggctcaggcccaacgaagaaaaaagccaaactgaatgcggcc
gaaagagcgctacgctctttcgttcagtttccaaatgcatccgaagctcacctcgcgatg
ggccgcacgctgactgttaacacagacttcacctcagatcaagcagatttcccagacatg
ctatttaacggatttgagacacccgcaccacctgaagaccccttctacctgagtcttagc
agcaatgggtctctctgctccctaaacgaattttctctgcccatggcgctgaaaaacaac
aacaggtcatatccttctctccaactaccccctgcactcacaacgccccctacaggcagt
ggcaaaaacgctgtgatgatcctaaatgagcttcggccaggactgaagtatgagtttgtg
gctgagagcggtgaaagccatgccaagaactttacaatggcagttactgtagacactcag
atgttccaaggctctggacggaataaaaagctggcgaaagcgagggcggcccaagcggct
ctgtcaggactttttaacatgcaactggaccagacaccatcccgacagccaatccccaga
gagggacttcagctacacctgcctcaggtccttgcggatgctgtttctcgtttagttgtg
gaaaagttcagtgagctgacggataacttcacgtcaccacatgcacggcggaaagtcctt
gcgggtgttgtgatgacaactggtacagatgtgaaggatgctcaggtcatttgcgtcacc
acgggaaccaagtgtataaatggggagtacatgagtgatcgaggactggcccttaacgac
tgccatgctgagatcatcgcacgtcgctccctcatcagatacctgtacagtcagctggaa
tacttcctcagcgacagcactgaggaacatgagaaatccatattcagatggtgtagtgaa
catggctaccggctaaaagatgatattcagttccatctgtatatcagcacatcgccctgc
ggagacgcccggatcttctccccccatgaggctggggccgaggaccagggtgaccgacat
ccaaaccgcaaagcccgcggacaactgcgaaccaagattgagtctggagaaggtacaata
cccgttcgtacgagtaacaccattcagacctgggatggagtgttgcagggagaacgactg
ctaaccatgtcgtgtagtgacaagattgccagatggaacatgatcggagtgcaggggtct
cttctgagtcactttacagaacccatctatttctccagtttaattttgggaagtctgtac
cacgcagaccatctttccagagccgtgtaccagcgcattgcagacatggacgatttgccc
aaaccatttgccctcaacagacctcttcttagtggtatcagtaacacagaagcaaggcaa
cctgggaaagctcccaacttcagcgtcaactggacagtcggagatcaggggttggagatc
attaacgccaccacaggaaaagatgatctcggaagaccgtctcacctctgtaaacacgcc
ctctatagtcgctgggtctgtctacatgccaagctcagtgaaactctgcggatccaagga
tctcggcaaggctcctaccacgaggcaaaacaagcagcagtggaatatcacgcggccaaa
cagactctcttcaatgctttctacaaagcgggacttggagcatgggttgaaaaacccatt
gaacaagaccagttttcccttacctcttaa
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