Cyprinus carpio (common carp): 109057932
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Entry
109057932 CDS
T05134
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109057932
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109057932
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109057932
NCBI-ProteinID:
XP_018930701
UniProt:
A0A9Q9WPP0
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All DBs
Position
B9:complement(18968204..18996473)
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AA seq
336 aa
AA seq
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MYSMMMETDLHSPGPQTNTNPGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAGGGVGMSPAGVGQRLESPGGHGGSAGAGYAHMNGWANGAYSGQVAAAAA
AAAMMQEAQLAYSQHPGSGSHHHHAHHHHPHNPQPMHRYDMTALQYSPISNSQSYMSASP
SGYGGISYTQHQNSSVASSAAIGTLSSLVKSEPNISPPVTTHSRGPCTGDLREMISMYLP
TGESGDPSVQSRLHALPQHYQSTTAGVNGTVPLTHI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggaccttcattccccgggaccccaaaccaacacgaat
ccgggacaaacgggtccaaactcggggagcaaagccaaccaagaccgcgtaaagagaccc
atgaacgcttttatggtctggtcccgaggccagcggcgaaaaatggctcaggagaacccc
aaaatgcacaactctgaaattagcaaaagactcggtgctgagtggaaggtgatgtcagag
gctgaaaagcggccctttattgatgaggcgaagcggttgcgcgccatgcacatgaaggag
catccggattacaaatacagaccgaggcgcaaaaccaagaccctgcttaaaaaggacaag
tactcgctggctggcggcttgctcggcggcgcgggtggcggggtcggaatgagtcctgca
ggggtcggccagaggttggagagtcctgggggtcacggaggctcggccggcgctggctac
gcgcacatgaacggctgggcgaacggcgcttactcaggtcaggtggccgccgcggcagca
gcggctgcgatgatgcaggaggcgcagctcgcctacagccagcacccaggcagtgggtct
caccatcaccacgctcatcaccatcacccgcacaaccctcagcccatgcaccgctacgat
atgactgctctccagtacagccccatctcgaactcccagagctacatgagcgcttctcca
tccggctacggtgggatatcatacacgcagcatcaaaactccagcgtcgcttcttctgcc
gccatcggtacgctgagctcgctcgtcaagtccgaacccaatataagccctccggtcacc
acacactcccgaggcccctgcaccggagacttgagagagatgattagcatgtatttacca
accggcgagtccggggatccgtctgtgcagagcagactgcatgccttaccgcagcactat
cagagcacaactgccggagtaaacggaactgtcccattgacgcatatttga
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