Cyprinus carpio (common carp): 109058000
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Entry
109058000 CDS
T05134
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109058000 (sox19b)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109058000 (sox19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109058000
NCBI-ProteinID:
XP_018930766
Ensembl:
ENSCCRG00000010552
UniProt:
A0A9Q9V1N9
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All DBs
Position
B7:complement(15430370..15432370)
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AA seq
293 aa
AA seq
DB search
MYSMMEHELKTAGQPHPHHNSPGMSPPVSGVGNAHHGSKTSCPPGGDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRAVHMKEYPDYK
YKPRRKTKALINNDKHPLVKHPIAPGNLLASAVAQGQGGSPRMDGYGWGHTGAYMGMQGE
ALGYPQQLHRYELSALQYPPAQTYMNGASSYSQMSYSGSPQQPSPVMSMVKPEPLSHSPT
GVPNHHRGAFQGDMRDMISMYIPGGDTSDTSNQRAYPGVQQHYLGGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagcatgaactgaagaccgcgggtcaacctcatccccaccacaac
agtccaggcatgtctcctccggtcagcggggtcggaaacgcgcaccacggatcaaaaacc
tcttgtccacccggcggggaccccatggacaaagtgaagcgtcccatgaatgcgtttatg
gtgtggtcccggggtcagcggaggaagatggcacaggagaaccccaaaatgcacaactcg
gagataagcaaacgcctcggtgcggaatggaaacttttaacggacaccgagaagcggccg
ttcatcgatgaggccaaacggctgcgggccgtacacatgaaggaataccccgactacaaa
tacaaacctcggcgtaagaccaaagccctcatcaacaacgacaaacaccctctcgtcaaa
caccctatcgcacccggtaacctgttggcatcagccgtggcacagggacaaggcgggagc
ccgagaatggacggctatggctggggtcacaccggtgcttatatgggaatgcagggtgaa
gcactcggatacccgcagcaactgcaccgatacgaactgtcagcgctccagtacccgccg
gcacagacatacatgaacggggccagctcttacagccaaatgtcatatagtgggagccct
cagcagcccagtccagtgatgtctatggttaaaccagaacccctatcccattcgcctact
ggagtaccaaaccaccaccgtggggctttccaaggggacatgagggacatgattagcatg
tacattccaggtggtgataccagcgatacctcaaaccagagggcctaccctggagtccag
cagcactatcttggtggaaccgttcccctcactcatatctga
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