Cyprinus carpio (common carp): 109058204
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Entry
109058204 CDS
T05134
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109058204 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109058204 (nvl)
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109058204 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_2
AAA_5
AAA_14
AAA_33
TIP49
NPHP3_N
nSTAND3
RNA_helicase
Mg_chelatase
AAA_28
IstB_IS21
AAA_18
ATPase
Viral_helicase1
Rad17
NACHT
ABC_tran
AAA_17
TsaE
Vps4_C
Zeta_toxin
AAA_3
Sigma54_activ_2
Sigma54_activat
DUF815
Motif
Other DBs
NCBI-GeneID:
109058204
NCBI-ProteinID:
XP_042624332
UniProt:
A0A9Q9YQ43
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Position
A13:complement(2737673..2748929)
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AA seq
781 aa
AA seq
DB search
MKNRGTYNIDPRLKHRVHQYLKSHGDPYVDISAMASELQQQFRVEYGRRNRTAFRIQVEK
VHAVICSESDISALENKHLAKRARRSQEDGDDSQVTEYSTDSEDDLPEHEHTNHMNSSLT
SLYQRGATPQKSADGEQENIFIDLCEEEASSTPKQRDSSKQEKEKTSKRGKLKRGKKSKH
DVDAEITAAIQAKKSKNKGHELQYSAVKFEDFGGSEEALEEVCKLLIHMRHPEVYQRLGV
VPPRGFLLHGPPGCGKTLLAQAVAGEVCLPMLKVSAPELVSGVSGESEQKLRELFEQAIS
SAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNSLSEPAQVLVIGATNRPDS
LDPALRRAGRFDREICLGIPDEAARLKILKTLCRKITLTEDFDYRQLARLTPGYVGADLM
ALCREAAMTSVNRILLQPSSEDVTAPKADLEQLLSLLKRNETLSEEQLSGLCVLMSDFKT
SLSRVQPSAKREGFATVPDVTWEDVGALQDIREELNMAIMAPINNPEHFRALGLNTPAGV
LLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVI
FFDEIDALCPRRSEHESGASVRVVNQLLTEMDGMGNRKQVFIMAATNRPDIIDRAVLRPG
RLDKTLYVGLPPPADRHAILVTITKNGTKPLLDSDVNLEEIAHDARCESFTGADLSALVR
EACVNALRVHLSSRPAQTHTEPEEGIRVSRIHFEDAFKKVRPSVSKKDQIMYEKLKETLT
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccgcggtacttataatatagatccgagactcaaacacagagtccatcagtat
ctgaagtcacacggtgacccgtatgtggacatctctgcgatggcctcggagctccagcag
cagttcagggtcgagtacggccgcaggaacaggacggctttcaggattcaagtggagaaa
gtgcatgcggtgatatgcagtgagtctgatatctctgctctggaaaacaaacatctggcc
aaaagagcgagacgcagccaagaggacggggacgacagtcaggtcacagagtacagcacc
gacagcgaggacgatctccccgaacatgaacacacaaatcacatgaacagctcgctgacg
tccctctatcagagaggagcgaccccccagaagagcgcagacggagagcaggagaacatc
ttcatcgatctgtgtgaggaggaggcctccagcacgccgaagcagagagattcatcaaag
caggagaaggaaaagacgtcaaagagagggaaactgaagagagggaagaagagcaaacac
gacgtggacgcagaaatcactgccgcaatacaggccaagaagagtaagaacaagggtcat
gagctgcagtactcagctgtgaagtttgaggatttcggcggcagtgaggaagctctagag
gaggtctgtaagctgctgatccacatgaggcatccggaggtgtaccagcggctgggagtg
gttcctccgcggggcttcctgctgcacgggccgccggggtgtgggaagaccctgctggct
caggctgtggctggagaggtgtgcttgccgatgctgaaggtctcggctccggagctggtg
tcaggagtctctggagaatcagagcagaagctgcgggaactgtttgagcaagccataagc
agcgctccctgtatcctgttcatcgatgagatcgatgccatcacgccaaaaagagagatc
gcttctaaagacatggagaggaggatcgtggcgcagttactcacctgcatggacgacctc
aattcattatcagaacccgctcaggtgttggttattggagccactaaccgtccggactcg
ctggatccggccctgcgtcgcgccggcaggtttgaccgcgagatctgtctggggatccct
gatgaggcggcgcgactgaagattctgaagacgctgtgtcgtaaaatcacgctgacggag
gacttcgactacagacagctggcgcgtctgacgccgggttatgtgggcgcagatctgatg
gcgctgtgtcgggaggcggccatgacctccgtcaacaggatcctgctgcagccgagcagt
gaagacgtcacagcaccgaaagcagatctggagcagctgttgtcgttgttgaagaggaac
gagactctgagcgaggagcagctctctggactctgtgtgctcatgtcagacttcaagacg
tcgttatccagagtgcagccgtccgccaagcgcgaggggttcgccaccgtcccagacgtc
acctgggaagacgtgggcgcgctgcaggacatccgtgaggagctcaacatggccatcatg
gctcccatcaataacccggagcatttccgagctctgggtctgaacacgcccgctggggtg
ctgctcgctggaccgcccggatgcggaaagaccctgttagccaaagctgttgctaacgag
tcaggcttaaacttcatctctgtcaagggtccagagctgctcaatatgtatgtgggtgag
agcgagcgggccgtccggcaggtcttccagaggggcaggaactccgcgccgtgcgtcatc
ttcttcgatgagatcgatgctctttgtcctcgtcgctcagagcatgagtcaggagccagc
gtccgcgtcgtaaaccagctgctcaccgagatggatggcatggggaaccgcaagcaggtt
ttcatcatggccgccaccaacaggccagatattattgatcgtgctgtgctcagaccagga
cgactggacaaaactctgtatgtgggtttacctcctcccgcagacagacacgccatatta
gtcactattactaagaacggcactaaaccacttctagattcagatgtcaatctcgaggaa
attgcccatgatgcacgttgtgagagttttacaggtgcagatctgtcggcgctggtgcga
gaggcgtgtgttaacgctctgagagttcacctgagctcacgaccagcacagacacacaca
gagccggaggagggcatcagagtgagccgaattcacttcgaagacgccttcaagaaggtg
cgaccgtccgtgtccaagaaggaccagataatgtatgaaaaactaaaagagaccctcacg
agatga
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