Cyprinus carpio (common carp): 109058377
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Entry
109058377 CDS
T05134
Symbol
nphp1
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-1
KO
K19657
nephrocystin-1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109058377 (nphp1)
Cilium and associated proteins [BR:
ccar03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
109058377 (nphp1)
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Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
SH3_3
hSH3
SH3_10
FAM176
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
109058377
NCBI-ProteinID:
XP_042598121
UniProt:
A0A9Q9XBK7
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All DBs
Position
B17:10966310..10974439
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AA seq
675 aa
AA seq
DB search
MPPRRRGPLQTVQRETDDIKRKVDALVRDAAEPDASDRTGTLERCKELQREVEEITKTLK
KLSKADEPAPVGNYDQCKRDEEKRLLTLYERLQSLALQLQPRDQTAGPSSSQRDQESEEE
NSDEEDESSEDEDAEEEVQDDYDDDDNADSGDEDIGPTATGQGSVSYIALSAFSGEEEGD
LSIQKGEVLKVLSKNKDGWWLAQNSKGQKGLVPKTFLKTSSPQDSERKNENEDEGESEEE
EEDPDIKSSKTSNWDTVRKAVTEIDATDVLSAMGAIPPGFRPSTLSRLLEEGRSYRASHF
IQPKLSQSQLSFKDLHMDPDTGKVHGRPSRVSLTLTLWSCRMIPPPGVGLQVLSRHVRLC
AFNGTQVLSNIHTVRATYNSKSPKTWSFSPRMTGMLPCLLDGDCFLRCDSESPDLGILFE
LGVTYIRNSTGERGDLSCGWAFLKLFDESGAPVALRTQELTVHGGTPFEKDTDMDTTSTK
RGYPTGVFQQMLLARKIPKLVVKLKSVNTRSRELLNLLPDTXVGCLSTLHLLATYRQIPP
XSHIIHKVKNNNLDLICSSVLTPFPDVLDQPDLMDAFRKSWTESEINLRRSDKRDINVLK
QMFVSVYMGSVFPLLYSAEMPAPCWADEEVESQRARIIYSPSQKTSVETLLSSQCSHQAF
DISQVTYDLISSAQH
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgagaaggagaggacctcttcagacggtccaaagagaaacggatgacatcaag
agaaaggtggacgctttggtgcgagatgctgctgaaccagatgcgtcggacaggacaggg
accttggagaggtgcaaagagttacagcgtgaagtggaggaaattacgaagactctgaag
aaattatctaaagcagatgagccggctccagtggggaattatgaccagtgtaagcgggac
gaggagaagcgtttgttgactttatatgagcgtctacagtctctagctcttcagctgcag
cctcgtgatcagacggctggaccaagttcgtcccagagagatcaggagagcgaggaggaa
aatagtgatgaggaagatgagagctctgaggatgaagatgctgaagaagaagtacaggat
gattatgatgatgatgataatgctgacagtggtgatgaggatatcggtccaactgccaca
ggacagggatctgtctcctacattgctctcagtgcattttcgggagaggaagaaggggac
ctcagcatccagaaaggagaggttttgaaagttctctctaagaataaggatggatggtgg
ctggctcaaaactcaaaaggccagaagggcctggtgcccaaaaccttcctgaagacgtct
tctccacaggatagtgagaggaagaatgagaatgaggatgagggggagagtgaagaggaa
gaggaggatcctgacataaagtccagcaaaacatccaattgggacacagtgcggaaggct
gttactgagatagatgctactgatgtgctttcagcgatgggtgccatcccaccaggcttc
agaccctccactctctccagactcctagaggaagggagatcttatagagcaagtcacttc
attcagcccaagcttagccaatcacaactctcctttaaagatctccatatggacccagac
acaggcaaggttcacggccggccatctagagtgagtttaaccctgaccctgtggagctgt
cgaatgatcccaccccccggggtcgggttacaggttctcagcaggcacgttcggctctgt
gcatttaacggaacccaggttttgagtaacattcacacagtcagagctacttacaactcc
aagagcccaaagacctggagcttttctccacggatgactgggatgctgccctgtctactg
gatggagactgtttcctgcgttgtgattctgaatctcctgatcttggaattctgtttgaa
ttgggtgtaacctacataaggaattccacaggggagagaggagacctcagctgtggctgg
gcgttccttaaactgtttgatgaaagtggagcccctgttgctctacggacacaagagctc
actgtccatggtggcacaccatttgagaaagacactgatatggataccacatctaccaaa
agaggatatcctaccggtgtgtttcagcagatgttgctggccaggaagatccctaaactt
gttgttaagctcaaatcagtaaacacacgcagcagagagcttctgaatctgctgccagac
actnnagtaggatgtctgtccacattacatctcctggcaacatacaggcaaatacctcct
taatctcacataattcacaaagtaaaaaacaataacctagatctgatctgcagctcggtt
ctaacacccttccctgatgttctagatcagccagacctgatggatgcatttaggaaatca
tggaccgaatcagagattaacctgagaagatctgataagagggatattaatgtgttgaag
cagatgtttgtgagcgtttatatgggcagcgtgtttccattgttgtactctgcggagatg
cctgctccctgctgggcagatgaggaagtggaatctcaacgtgctcgtattatctacagc
ccttcccaaaaaacctcagtggaaactctgctttcctctcaatgttcacatcaagccttt
gacatctcacaggtcacctatgacctcatcagcagtgcccagcactga
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