KEGG   Cyprinus carpio (common carp): 109058528
Entry
109058528         CDS       T05134                                 
Name
(RefSeq) negative elongation factor D isoform X1
  KO
K15181  negative elongation factor C/D
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109058528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccar03021]
    109058528
Transcription machinery [BR:ccar03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     109058528
SSDB
Motif
Pfam: TH1 DUF4817 CARD_2
Other DBs
NCBI-GeneID: 109058528
NCBI-ProteinID: XP_042582435
Ensembl: ENSCCRG00000018541
UniProt: A0A8C2B4I8
LinkDB
Position
B6:complement(25694341..25700608)
AA seq 579 aa
MDEEYYGNVGEWEGQDGNTEDGYADAEADGKVQEECLQKFSSRDYIMEPTVFNTLKTYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEQNLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQE
EQGGSAMRRIGQEVQKYAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVITPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMMN
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggacgaagaatactacggcaatgttggagaatgggagggacaagacggcaacacggag
gatggatacgcggatgctgaggctgatgggaaagttcaagaggagtgtctgcagaaattc
tccagcagagactatatcatggagcccaccgtgtttaacaccctgaaaacgtatttccag
gcaggtgggtcacctgagcatgtcatccagctgctgtcagagaactactctgctgtagca
cagacggtcaatcttctggcggagtggctcattcagatgggtgtggagcccgcgcaggtg
caggagcgtgtggagaatcatttaaagagtctcttaatcaaacactttgaccctcagaaa
gcagattctattttcactgttgagggagagacaccagcatggctggagcagatgatagca
cacacaacatggagagatctgttctacaaactagctgaggctcatccagactgcctgatg
ctcaacttcactgtcaagttgatttcagatgcaggatatcaaggagagatcacaagcgtg
tccacagcctgtcaacagttggaggttttctccagagtcctgcgaacctctctcgccaca
ctgctggatggaggggaacagaacctggagaaaaatctgcctgaatttgctaagatggtt
tgtcacggagagcacacatacttgttcgctcaagccatgatgtccatcctcgctcaagag
gagcagggcggctcagcaatgcggcgaattggacaggaagtacagaaatatgcccatgag
aggggacatgatgccagtcagatcacattagcgctgggcacagctgctgcgtatccgcgt
gcatgccaggctcttggtgccatgctgtccaaaggggctctgaacccagcagatatcaca
gtcctgttcaagatgttcagtagcatggatccacctcctgtagaactgatccgagttcct
gcctttttggatctgttcatgcagtcactatttaaacccggagctaaaatcaaccaggac
cacaagcacaaatacatccacattttagcgtatgctgctagtgttgtggaaacatggaaa
aagaacaagcgtgtgaatataaataaagatgagctgaagtcgacctcaaaggccattgag
acggttcataatctctgctgcaatgagaacaagggagctactgagctagtagcagagctc
agcacgttataccagtgcataaggtttccagtggtagcgatgggagtgctgaagtgggtc
gactggacagtgtctgagcctcgttacttccagctacagacagaccacactcctgtccat
ctagcactactggatgagatcagcacatgccatcagcttctccatccgcaggtcttacag
ttgctcatcaaactgttcgagaccgagcactcgcagcttgatgtcatggagcagctggag
ctcaagaagacattactggatcgtatggttcacctattgagtcgaggttatgttcttcca
gtggtcggctacatccgcaaatgtcttgagaagctcaacacagatatttcactcatcaga
tactttgttacagaggttctagatgtgataacgcctccatacacctcagactttgttcag
ctgtttttgcccatcctagaaaacgacagcatagcgggaacaatccgcactgagggagaa
cacgaccctgtagctgagttcattgctcactgcaaatccaacttcattatgatgaactaa

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