Cyprinus carpio (common carp): 109058651
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Entry
109058651 CDS
T05134
Name
(RefSeq) putative ATP-dependent RNA helicase an3 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109058651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109058651
03041 Spliceosome [BR:
ccar03041
]
109058651
03036 Chromosome and associated proteins [BR:
ccar03036
]
109058651
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109058651
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109058651
mRNA cycle factors
Common to processing body (P body) and stress granule
109058651
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109058651
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109058651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109058651
NCBI-ProteinID:
XP_042587439
Ensembl:
ENSCCRG00000014038
UniProt:
A0A9R0A6N7
LinkDB
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Position
B9:21323653..21338143
Genome browser
AA seq
728 aa
AA seq
DB search
MSHVVVDGSHGLDQQLAVLDLNSADGQCAGSGRRYIPPHLRNKDASENAGNAYSSGRQSG
YSVAPVQSYSPGWDGGRSNGFVNGYHDGRMNGTANFGHGPPRNDRGGRGGFRGNRNGGSF
NQPMHNSGYGSYENKDGGWNSVVNRDAYTSFGGRSDRGKSTFNDRGAGSRGRYERGGFGG
GNGGNSRWVEEFRDEEDWSKPLSPNERLEHELFSGSNTGINFEKYDDIPVEATGTNSPGH
IESFHDVDMGEIIMSNISLTRYTRPTPVQKYAIPIIKAKRDLMACAQTGSGKTAAFLLPV
LSQIYTDGPGEALQATKASTQQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRS
RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRML
DMGFEPQIRRIVEQDTMPPKGARQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSE
NITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHG
DRSQRDREEALHQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTG
RVGNLGLATSFYNDKNSNLTKDLLDILVEAKQEVPSWLENLAYEHQHKSTNRGRPKRFSG
GFGARDYRQMAGGSAAFGNRGARNTGGHGGNRGFGGNKGGFGSFGGDSYGGSYGNYGGNY
AQVDWWGN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgtcgacggttcacacggtctagaccagcagcttgctgtcttagac
ttgaactcagctgatggacagtgtgctggctctggtcggcgttacattcctcctcatttg
agaaacaaagacgcatcagaaaatgcaggaaatgcttattcctctggtagacagagcggt
tattcagtggcaccagtacagagctattctcctggatgggacggcggtcgtagcaatggt
tttgtcaatgggtaccatgacggtcgtatgaatgggactgcaaactttggccatggacct
cctcgtaatgacagaggtggacgtggtggctttcgtggaaataggaacggtggttccttc
aaccagccaatgcataattcaggttatggcagttatgagaacaaagatggaggctggaac
tctgtggtaaacagagatgcctacactagctttggtgggcgttctgacagagggaagtct
accttcaatgatagaggagctggctcaagaggaaggtatgagcgtggaggatttggagga
ggcaacggagggaacagtcgttgggttgaagaattcagagatgaagaggactggtcaaag
ccactatcccccaacgagcgtctggaacatgagctgttctctgggagcaacaccgggatt
aactttgagaagtatgatgacattcctgtggaggccactggaacaaacagtcctgggcat
attgagagtttccatgacgtggacatgggcgagatcattatgagcaacatctctctgacc
cgctacacacggcctactcctgttcaaaagtatgcaatccccatcatcaaggccaagagg
gacctgatggcctgtgctcaaacaggctcggggaagactgcagccttcttacttcccgtg
cttagtcagatctacactgatggacctggagaggcactgcaggccaccaaagccagcacc
cagcaggagaatgggaagtacggccgtcgtaagcagtatcccatctcgctggttctggct
ccaaccagagaacttgctcttcaaatttatgatgaggccagaaagttctcttaccgctcc
agagtgcggccgtgtgtggtgtacggaggcgcagatatagggcagcagatccgtgatttg
gaaagaggctgtcacctgctagtagccacaccgggtcgtctggtagacatgatggagcgg
ggcaagattggcctagactactgcaaatacctggtgttggacgaggcagacagaatgctg
gatatgggttttgaaccccagatcagacgtatcgtggagcaggacaccatgcctcctaaa
ggtgctcgccagaccatgatgttcagtgccaccttcccaaaagagatccagattctggcc
cgtgactttctggaggagtacatcttcctggcagtgggccgtgtgggctccacctcagag
aatatcacccagaaggtggtttgggtggaagaaaatgacaagcgctccttccttcttgac
ctgcttaatgcaacaggcaaggattctctcacactggtgtttgtggagactaagaagggt
gctgatgctcttgaggacttcctctaccgcgaaggctatgcctgcaccagtatccatggt
gaccggtctcagcgtgatcgtgaggaagcactccaccagttccggtctgggcgctgtcct
atcatggttgccacagctgtggctgcacgtggccttgacatctccaacgtgaaacatgtg
atcaattttgacttgcctagtgacattgaggaatatgtccaccgcatcggtcgtacaggc
cgtgtaggaaaccttggactggccacatccttctataatgataaaaacagcaacctcact
aaagatctactggacatcttggtggaggccaagcaggaggtgccttcctggcttgagaac
ctagcctatgagcaccagcacaagagcaccaaccgcggacgccccaagagattctctggt
ggctttggagccagggattaccgccagatggctgggggcagcgctgctttcggcaaccgt
ggtgctcgcaacactggtggccatggagggaacagaggttttggaggcaataagggtggt
tttgggagtttcggtggtgacagctacgggggcagctatggaaactatggaggaaactat
gcccaggtggactggtggggcaactaa
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